PDB entry 2bpg

View 2bpg on RCSB PDB site
Description: structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddctp
Class: transferase/DNA
Keywords: protein-DNA complex, transferase/DNA complex
Deposited on 1994-05-19, released 1994-08-31
The last revision prior to the SCOP 1.75 freeze date was dated 2008-09-30, with a file datestamp of 2008-09-26.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: 0.199
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase beta
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2bpga1, d2bpga3, d2bpga4
  • Chain 'B':
    Compound: DNA polymerase beta
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2bpgb1, d2bpgb3, d2bpgb4
  • Chain 'C':
    Compound: DNA (5'-d(*gp*gp*gp*cp*gp*cp*cp*g)-3')
  • Chain 'D':
    Compound: DNA (5'-d(*cp*gp*gp*cp*gp*cp*c)-3')
  • Chain 'P':
    Compound: DNA (5'-d(*cp*gp*gp*cp*gp*cp*c)-3')
  • Chain 'T':
    Compound: DNA (5'-d(*gp*gp*gp*cp*gp*cp*cp*g)-3')
  • Heterogens: MG, DCT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2bpgA (A:)
mskrkapqetlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegik
tledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgs
frrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcq
lpsendeneyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdseqdifdyiqwryrepkdrse

    Sequence, based on observed residues (ATOM records): (download) 
    >2bpgA (A:)
etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
iaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrkn
edklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaess
gdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcqlpseneyp
hrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvagepl
pvdseqdifdyiqwryrepkdrse

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2bpgB (B:)
mskrkapqetlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegik
tledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgs
frrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcq
lpsendeneyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdseqdifdyiqwryrepkdrse

    Sequence, based on observed residues (ATOM records): (download) 
    >2bpgB (B:)
etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
iaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrkn
edklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaess
gdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcqlpseneyp
hrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvagepl
pvdseqdifdyiqwryrepkdrse

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.