PDB entry 2bgr

View 2bgr on RCSB PDB site
Description: crystal structure of hiv-1 tat derived nonapeptides tat(1-9) bound to the active site of dipeptidyl peptidase IV (cd26)
Class: hydrolase
Keywords: hydrolase, hydrolase-complex, dppiv, alpha/beta-hydrolase fold, beta-propeller fold
Deposited on 2005-01-04, released 2005-01-27
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-31.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.16
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dipeptidyl peptidase IV
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2bgra1, d2bgra2
  • Chain 'B':
    Compound: dipeptidyl peptidase IV
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2bgrb1, d2bgrb2
  • Chain 'Y':
    Compound: hiv-1 tat protein derived n-terminal nonapeptide
    Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1, synthetic [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Z':
    Compound: hiv-1 tat protein derived n-terminal nonapeptide
    Species: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1, synthetic [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2bgrA (A:)
nkgtddatadsrktytltdylkntyrlklyslrwisdheylykqennilvfnaeygnssv
flenstfdefghsindysispdgqfilleynyvkqwrhsytasydiydlnkrqliteeri
pnntqwvtwspvghklayvwnndiyvkiepnlpsyritwtgkediiyngitdwvyeeevf
saysalwwspngtflayaqfndtevplieysfysdeslqypktvrvpypkagavnptvkf
fvvntdslssvtnatsiqitapasmligdhylcdvtwatqerislqwlrriqnysvmdic
dydessgrwnclvarqhiemsttgwvgrfrpsephftldgnsfykiisneegyrhicyfq
idkkdctfitkgtwevigiealtsdylyyisneykgmpggrnlykiqlsdytkvtclsce
lnpercqyysvsfskeakyyqlrcsgpglplytlhssvndkglrvlednsaldkmlqnvq
mpskkldfiilnetkfwyqmilpphfdkskkypllldvyagpcsqkadtvfrlnwatyla
steniivasfdgrgsgyqgdkimhainrrlgtfevedqieaarqfskmgfvdnkriaiwg
wsyggyvtsmvlgsgsgvfkcgiavapvsrweyydsvyterymglptpednldhyrnstv
msraenfkqveyllihgtaddnvhfqqsaqiskalvdvgvdfqamwytdedhgiasstah
qhiythmshfikqcfslp

    Sequence, based on observed residues (ATOM records): (download) 
    >2bgrA (A:)
dsrktytltdylkntyrlklyslrwisdheylykqennilvfnaeygnssvflenstfde
fghsindysispdgqfilleynyvkqwrhsytasydiydlnkrqliteeripnntqwvtw
spvghklayvwnndiyvkiepnlpsyritwtgkediiyngitdwvyeeevfsaysalwws
pngtflayaqfndtevplieysfysdeslqypktvrvpypkagavnptvkffvvntdsls
svtnatsiqitapasmligdhylcdvtwatqerislqwlrriqnysvmdicdydessgrw
nclvarqhiemsttgwvgrfrpsephftldgnsfykiisneegyrhicyfqidkkdctfi
tkgtwevigiealtsdylyyisneykgmpggrnlykiqlsdytkvtclscelnpercqyy
svsfskeakyyqlrcsgpglplytlhssvndkglrvlednsaldkmlqnvqmpskkldfi
ilnetkfwyqmilpphfdkskkypllldvyagpcsqkadtvfrlnwatylasteniivas
fdgrgsgyqgdkimhainrrlgtfevedqieaarqfskmgfvdnkriaiwgwsyggyvts
mvlgsgsgvfkcgiavapvsrweyydsvyterymglptpednldhyrnstvmsraenfkq
veyllihgtaddnvhfqqsaqiskalvdvgvdfqamwytdedhgiasstahqhiythmsh
fikqcfslp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2bgrB (B:)
nkgtddatadsrktytltdylkntyrlklyslrwisdheylykqennilvfnaeygnssv
flenstfdefghsindysispdgqfilleynyvkqwrhsytasydiydlnkrqliteeri
pnntqwvtwspvghklayvwnndiyvkiepnlpsyritwtgkediiyngitdwvyeeevf
saysalwwspngtflayaqfndtevplieysfysdeslqypktvrvpypkagavnptvkf
fvvntdslssvtnatsiqitapasmligdhylcdvtwatqerislqwlrriqnysvmdic
dydessgrwnclvarqhiemsttgwvgrfrpsephftldgnsfykiisneegyrhicyfq
idkkdctfitkgtwevigiealtsdylyyisneykgmpggrnlykiqlsdytkvtclsce
lnpercqyysvsfskeakyyqlrcsgpglplytlhssvndkglrvlednsaldkmlqnvq
mpskkldfiilnetkfwyqmilpphfdkskkypllldvyagpcsqkadtvfrlnwatyla
steniivasfdgrgsgyqgdkimhainrrlgtfevedqieaarqfskmgfvdnkriaiwg
wsyggyvtsmvlgsgsgvfkcgiavapvsrweyydsvyterymglptpednldhyrnstv
msraenfkqveyllihgtaddnvhfqqsaqiskalvdvgvdfqamwytdedhgiasstah
qhiythmshfikqcfslp

    Sequence, based on observed residues (ATOM records): (download) 
    >2bgrB (B:)
dsrktytltdylkntyrlklyslrwisdheylykqennilvfnaeygnssvflenstfde
fghsindysispdgqfilleynyvkqwrhsytasydiydlnkrqliteeripnntqwvtw
spvghklayvwnndiyvkiepnlpsyritwtgkediiyngitdwvyeeevfsaysalwws
pngtflayaqfndtevplieysfysdeslqypktvrvpypkagavnptvkffvvntdsls
svtnatsiqitapasmligdhylcdvtwatqerislqwlrriqnysvmdicdydessgrw
nclvarqhiemsttgwvgrfrpsephftldgnsfykiisneegyrhicyfqidkkdctfi
tkgtwevigiealtsdylyyisneykgmpggrnlykiqlsdytkvtclscelnpercqyy
svsfskeakyyqlrcsgpglplytlhssvndkglrvlednsaldkmlqnvqmpskkldfi
ilnetkfwyqmilpphfdkskkypllldvyagpcsqkadtvfrlnwatylasteniivas
fdgrgsgyqgdkimhainrrlgtfevedqieaarqfskmgfvdnkriaiwgwsyggyvts
mvlgsgsgvfkcgiavapvsrweyydsvyterymglptpednldhyrnstvmsraenfkq
veyllihgtaddnvhfqqsaqiskalvdvgvdfqamwytdedhgiasstahqhiythmsh
fikqcfslp

  • Chain 'Y':
    No sequence available.

  • Chain 'Z':
    No sequence available.