PDB entry 1zm7

View 1zm7 on RCSB PDB site
Description: Crystal structure of D. melanogaster deoxyribonucleoside kinase mutant N64D in complex with dTTP
Class: transferase
Keywords: Drosohila melanogaster, dnk, N64D, mutant, TRANSFERASE
Deposited on 2005-05-10, released 2005-05-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: deoxynucleoside kinase
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: dnk
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XZT6
      • engineered (63)
    Domains in SCOPe 2.07: d1zm7a_
  • Chain 'B':
    Compound: deoxynucleoside kinase
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: dnk
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XZT6
      • engineered (63)
    Domains in SCOPe 2.07: d1zm7b_
  • Chain 'C':
    Compound: deoxynucleoside kinase
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: dnk
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XZT6
      • engineered (63)
    Domains in SCOPe 2.07: d1zm7c_
  • Chain 'D':
    Compound: deoxynucleoside kinase
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: dnk
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9XZT6
      • engineered (63)
    Domains in SCOPe 2.07: d1zm7d_
  • Heterogens: TTP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1zm7A (A:)
    maeaascarkgtkyaegtqpftvliegnigsgkttylnhfekykndiclltepvekwrnv
    ngvdllelmykdpkkwampfqsyvtltmlqshtaptnkklkimersifsarycfvenmrr
    ngsleqgmyntleewykfieesihvqadliiylrtspevayerirqrarseescvplkyl
    qelhelhedwlihqrrpqsckvlvldadlnlenigteyqrsessifdais
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zm7A (A:)
    tkyaegtqpftvliegnigsgkttylnhfekykndiclltepvekwrnvngvdllelmyk
    dpkkwampfqsyvtltmlqshtaptnkklkimersifsarycfvenmrrngsleqgmynt
    leewykfieesihvqadliiylrtspevayerirqrarseescvplkylqelhelhedwl
    ihqrrpqsckvlvldad
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1zm7B (B:)
    maeaascarkgtkyaegtqpftvliegnigsgkttylnhfekykndiclltepvekwrnv
    ngvdllelmykdpkkwampfqsyvtltmlqshtaptnkklkimersifsarycfvenmrr
    ngsleqgmyntleewykfieesihvqadliiylrtspevayerirqrarseescvplkyl
    qelhelhedwlihqrrpqsckvlvldadlnlenigteyqrsessifdais
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zm7B (B:)
    tkyaegtqpftvliegnigsgkttylnhfekykndiclltepvekwrnvngvdllelmyk
    dpkkwampfqsyvtltmlqshtaptnkklkimersifsarycfvenmrrngsleqgmynt
    leewykfieesihvqadliiylrtspevayerirqrarseescvplkylqelhelhedwl
    ihqrrpqsckvlvldadl
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1zm7C (C:)
    maeaascarkgtkyaegtqpftvliegnigsgkttylnhfekykndiclltepvekwrnv
    ngvdllelmykdpkkwampfqsyvtltmlqshtaptnkklkimersifsarycfvenmrr
    ngsleqgmyntleewykfieesihvqadliiylrtspevayerirqrarseescvplkyl
    qelhelhedwlihqrrpqsckvlvldadlnlenigteyqrsessifdais
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zm7C (C:)
    tkyaegtqpftvliegnigsgkttylnhfekykndiclltepvekwrnvngvdllelmyk
    dpkkwampfqsyvtltmlqshtaptnkklkimersifsarycfvenmrrngsleqgmynt
    leewykfieesihvqadliiylrtspevayerirqrarseescvplkylqelhelhedwl
    ihqrrpqsckvlvldadl
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1zm7D (D:)
    maeaascarkgtkyaegtqpftvliegnigsgkttylnhfekykndiclltepvekwrnv
    ngvdllelmykdpkkwampfqsyvtltmlqshtaptnkklkimersifsarycfvenmrr
    ngsleqgmyntleewykfieesihvqadliiylrtspevayerirqrarseescvplkyl
    qelhelhedwlihqrrpqsckvlvldadlnlenigteyqrsessifdais
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zm7D (D:)
    tkyaegtqpftvliegnigsgkttylnhfekykndiclltepvekwrnvngvdllelmyk
    dpkkwampfqsyvtltmlqshtaptnkklkimersifsarycfvenmrrngsleqgmynt
    leewykfieesihvqadliiylrtspevayerirqrarseescvplkylqelhelhedwl
    ihqrrpqsckvlvldad