PDB entry 1zeo
View 1zeo on RCSB PDB site
Description: Crystal Structure of Human PPAR-gamma Ligand Binding Domain Complexed with an Alpha-Aryloxyphenylacetic Acid Agonist
Class: transcription
Keywords: Nuclear receptor, Ligand Binding Domain, LBD, Alpha helix sandwich, PPAR-RXR heterodimer, TRANSCRIPTION
Deposited on
2005-04-19, released
2006-04-25
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.222
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peroxisome proliferator activated receptor gamma
Species: Homo sapiens [TaxId:9606]
Gene: PPARG, NR1C3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1zeoa_ - Chain 'B':
Compound: Peroxisome proliferator activated receptor gamma
Species: Homo sapiens [TaxId:9606]
Gene: PPARG, NR1C3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1zeob_ - Heterogens: C01, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1zeoA (A:)
gsqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmged
kikfkhitplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllky
gvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnaleld
dsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmt
dlrqivtehvqllqvikktetdmslhpllqeiykdly
Sequence, based on observed residues (ATOM records): (download)
>1zeoA (A:)
esadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikeqs
kevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslm
nkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviils
gdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllq
vikktetdmslhpllqeiykdly
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1zeoB (B:)
gsqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmged
kikfkhitplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllky
gvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnaleld
dsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmt
dlrqivtehvqllqvikktetdmslhpllqeiykdly
Sequence, based on observed residues (ATOM records): (download)
>1zeoB (B:)
esadlralakhlydsyiksfpltkakarailtgkdkspfviydmnslmmgedevairifq
gcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvlise
gqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgllnv
kpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikktehpl
lqeiykd