PDB entry 1vft

View 1vft on RCSB PDB site
Description: Crystal structure of L-cycloserine-bound form of alanine racemase from D-cycloserine-producing Streptomyces lavendulae
Class: isomerase
Keywords: TIM-barrel, Greek-key motief, ISOMERASE
Deposited on 2004-04-19, released 2004-09-14
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.197
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: alanine racemase
    Species: Streptomyces lavendulae [TaxId:1914]
    Gene: alr
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1vfta2, d1vfta3, d1vfta4
  • Chain 'B':
    Compound: alanine racemase
    Species: Streptomyces lavendulae [TaxId:1914]
    Gene: alr
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1vftb1, d1vftb2, d1vftb3
  • Heterogens: CL, DCS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vftA (A:)
mnetptrvyaeidldavranvralraraprsalmavvksnayghgavpcaraaqeagaaw
lgtatpeealelraagiqgrimcwlwtpggpwreaietdidvsvsgmwaldevraaaraa
grtariqlkadtglgrngcqpadwaelvgaavaaqaegtvqvtgvwshfacadepghpsi
rlqldafrdmlayaekegvdpevrhianspatltlpethfdlvrtglavygvspspelgt
paqlglrpamtlraslalvktvpaghgvsyghhyvtesethlalvpagyadgiprnasgr
gpvlvagkirraagriamdqfvvdlgedlaeagdeavilgdaergeptaedwaqaahtia
yeivtriggrvprvylgglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vftA (A:)
tptrvyaeidldavranvralraraprsalmavvksnayghgavpcaraaqeagaawlgt
atpeealelraagiqgrimcwlwtpggpwreaietdidvsvsgmwaldevraaaraagrt
ariqlkadtglgrngcqpadwaelvgaavaaqaegtvqvtgvwshfacadepghpsirlq
ldafrdmlayaekegvdpevrhianspatltlpethfdlvrtglavygvspspelgtpaq
lglrpamtlraslalvktvpaghgvsyghhyvtesethlalvpagyadgiprnasgrgpv
lvagkirraagriamdqfvvdlgedlaeagdeavilgdaergeptaedwaqaahtiayei
vtriggrvprvylgglehhhhh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1vftB (B:)
mnetptrvyaeidldavranvralraraprsalmavvksnayghgavpcaraaqeagaaw
lgtatpeealelraagiqgrimcwlwtpggpwreaietdidvsvsgmwaldevraaaraa
grtariqlkadtglgrngcqpadwaelvgaavaaqaegtvqvtgvwshfacadepghpsi
rlqldafrdmlayaekegvdpevrhianspatltlpethfdlvrtglavygvspspelgt
paqlglrpamtlraslalvktvpaghgvsyghhyvtesethlalvpagyadgiprnasgr
gpvlvagkirraagriamdqfvvdlgedlaeagdeavilgdaergeptaedwaqaahtia
yeivtriggrvprvylgglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1vftB (B:)
ptrvyaeidldavranvralraraprsalmavvksnayghgavpcaraaqeagaawlgta
tpeealelraagiqgrimcwlwtpggpwreaietdidvsvsgmwaldevraaaraagrta
riqlkadtglgrngcqpadwaelvgaavaaqaegtvqvtgvwshfacadepghpsirlql
dafrdmlayaekegvdpevrhianspatltlpethfdlvrtglavygvspspelgtpaql
glrpamtlraslalvktvpaghgvsyghhyvtesethlalvpagyadgiprnasgrgpvl
vagkirraagriamdqfvvdlgedlaeagdeavilgdaergeptaedwaqaahtiayeiv
triggrvprvylgglehhhh