PDB entry 1uqs
View 1uqs on RCSB PDB site
Description: the crystal structure of human cd1b with a bound bacterial glycolipid
Class: glycoprotein
Keywords: glycoprotein, lipid, gmm, cd1b, MHC, antigen presentation
Deposited on
2003-10-16, released
2003-10-30
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.236
AEROSPACI score: 0.13
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: T-cell surface glycoprotein cd1b
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- PDB 1UQS
- Uniprot P29016 (Start-279)
Domains in SCOPe 2.07: d1uqsa1, d1uqsa2, d1uqsa3 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1uqsb1, d1uqsb2 - Heterogens: GMM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1uqsA (A:)
mgsehafqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgn
fsdkevaeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrga
lggldflsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnag
kadlqrqvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilp
nanwtwylratldvadgeaaglscrvkhsslegqdiilywgpgsggglndifeaqkiewh
Sequence, based on observed residues (ATOM records): (download)
>1uqsA (A:)
afqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgnfsdke
vaeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrgalggld
flsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnagkadlq
rqvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnanwt
wylratldvadgeaaglscrvkhsslegqdiilywgpgsgg
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1uqsB (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm