PDB entry 1umr
View 1umr on RCSB PDB site
Description: Crystal structure of the platelet activator convulxin, a disulfide linked a4b4 cyclic tetramer from the venom of Crotalus durissus terrificus
Class: sugar-binding protein
Keywords: lectin, c-type lectin, platelet, sugar-binding protein, activator, snake venom
Deposited on
2003-08-28, released
2003-11-21
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-11-20, with a file datestamp of
2013-11-15.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.19
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: convulxin alpha
Species: CROTALUS DURISSUS TERRIFICUS [TaxId:8732]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1umra_ - Chain 'B':
Compound: convulxin alpha
Species: CROTALUS DURISSUS TERRIFICUS [TaxId:8732]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1umrb_ - Chain 'C':
Compound: convulxin beta
Species: CROTALUS DURISSUS TERRIFICUS [TaxId:8732]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1umrc_ - Chain 'D':
Compound: convulxin beta
Species: CROTALUS DURISSUS TERRIFICUS [TaxId:8732]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1umrd_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1umrA (A:)
glhcpsdwyyydqhcyrifneemnwedaewfctkqakgahlvsiksakeadfvawmvtqn
ieesfshvsiglrvqnkekqcstkwsdgssvsydnlldlyitkcsllkketgfrkwfvas
cigkipfvckfppqc
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1umrB (B:)
glhcpsdwyyydqhcyrifneemnwedaewfctkqakgahlvsiksakeadfvawmvtqn
ieesfshvsiglrvqnkekqcstkwsdgssvsydnlldlyitkcsllkketgfrkwfvas
cigkipfvckfppqc
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1umrC (C:)
gfccpshwssydrycykvfkqemtwadaekfctqqhtgshlvsfhsteevdfvvkmthqs
lkstffwiganniwnkcnwqwsdgtkpeykewheefeclisrtfdnqwlsapcsdtysfv
ckfea
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1umrD (D:)
gfccpshwssydrycykvfkqemtwadaekfctqqhtgshlvsfhsteevdfvvkmthqs
lkstffwiganniwnkcnwqwsdgtkpeykewheefeclisrtfdnqwlsapcsdtysfv
ckfea