PDB entry 1rkd

View 1rkd on RCSB PDB site
Description: e. coli ribokinase complexed with ribose and ADP
Class: carbohydrate kinase
Keywords: carbohydrate kinase, ribose, nucleotide binding, transferase
Deposited on 1997-11-29, released 1998-03-04
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: 0.221
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribokinase
    Species: Escherichia coli [TaxId:83333]
    Gene: RBSK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1rkda_
  • Heterogens: RIB, PO4, ADP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1rkdA (A:)
mqnagslvvlgsinadhilnlqsfptpgetvtgnhyqvafggkganqavaagrsganiaf
iactgddsigesvrqqlatdniditpvsvikgestgvalifvngegenvigihaganaal
spalveaqrerianasallmqlesplesvmaaakiahqnktivalnpaparelpdellal
vdiitpneteaekltgirvendedaakaaqvlhekgirtvlitlgsrgvwasvngegqrv
pgfrvqavdtiaagdtfngalitalleekplpeairfahaaaaiavtrkgaqpsvpwree
idafldrqr

    Sequence, based on observed residues (ATOM records): (download) 
    >1rkdA (A:)
agslvvlgsinadhilnlqsfptpgetvtgnhyqvafggkganqavaagrsganiafiac
tgddsigesvrqqlatdniditpvsvikgestgvalifvngegenvigihaganaalspa
lveaqrerianasallmqlesplesvmaaakiahqnktivalnpaparelpdellalvdi
itpneteaekltgirvendedaakaaqvlhekgirtvlitlgsrgvwasvngegqrvpgf
rvqavdtiaagdtfngalitalleekplpeairfahaaaaiavtrkgaqpsvpwreeida
fldrqr