PDB entry 1qne
View 1qne on RCSB PDB site
Description: crystal structure of the adenovirus major late promoter tata box bound to wild-type tbp (arabidopsis thaliana tbp isoform 2).
Class: tata box-binding protein (tbp)
Keywords: tata box-binding protein (tbp), adenovirus major late promoter (admlp) tata box, tbp-tata element complex
Deposited on
1999-10-14, released
2000-02-01
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: transcription initiation factor tfiid-1
Species: Arabidopsis thaliana [TaxId:3702]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1qnea1, d1qnea2 - Chain 'B':
Compound: transcription initiation factor tfiid-1
Species: Arabidopsis thaliana [TaxId:3702]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1qneb1, d1qneb2 - Chain 'C':
Compound: DNA (5'-d(*gp*cp*tp*ap*tp*ap*ap*ap*ap*gp*gp*gp*cp*a)-3')
- Chain 'D':
Compound: DNA (5'-d(*tp*gp*cp*cp*cp*tp*tp*tp*tp*ap*tp*ap*gp*c)-3')
- Chain 'E':
Compound: DNA (5'-d(*gp*cp*tp*ap*tp*ap*ap*ap*ap*gp*gp*gp*cp*a)-3')
- Chain 'F':
Compound: DNA (5'-d(*tp*gp*cp*cp*cp*tp*tp*tp*tp*ap*tp*ap*gp*c)-3')
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1qneA (A:)
mtdqglegsnpvdlskhpsgivptlqnivstvnldckldlkaialqarnaeynpkrfaav
imrirepkttalifasgkmvctgaksedfskmaarkyarivqklgfpakfkdfkiqnivg
scdvkfpirleglayshaafssyepelfpgliyrmkvpkivllifvsgkivitgakmrde
tykafeniypvlsefrkiqq
Sequence, based on observed residues (ATOM records): (download)
>1qneA (A:)
vdlskhpsgivptlqnivstvnldckldlkaialqarnaeynpkrfaavimrirepktta
lifasgkmvctgaksedfskmaarkyarivqklgfpakfkdfkiqnivgscdvkfpirle
glayshaafssyepelfpgliyrmkvpkivllifvsgkivitgakmrdetykafeniypv
lsefrki
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1qneB (B:)
mtdqglegsnpvdlskhpsgivptlqnivstvnldckldlkaialqarnaeynpkrfaav
imrirepkttalifasgkmvctgaksedfskmaarkyarivqklgfpakfkdfkiqnivg
scdvkfpirleglayshaafssyepelfpgliyrmkvpkivllifvsgkivitgakmrde
tykafeniypvlsefrkiqq
Sequence, based on observed residues (ATOM records): (download)
>1qneB (B:)
pvdlskhpsgivptlqnivstvnldckldlkaialqarnaeynpkrfaavimrirepktt
alifasgkmvctgaksedfskmaarkyarivqklgfpakfkdfkiqnivgscdvkfpirl
eglayshaafssyepelfpgliyrmkvpkivllifvsgkivitgakmrdetykafeniyp
vlsefrki
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.