PDB entry 1ojo

View 1ojo on RCSB PDB site
Description: specificity and mechanism of streptococcus pneumoniae hyaluronate lyase: complex of the tyr408phe mutant with 4-sulphated chondroitin disaccharide
Class: lyase
Keywords: lyase, protein-carbohydrate complex
Deposited on 2003-07-11, released 2003-10-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hyaluronate lyase
    Species: Streptococcus pneumoniae [TaxId:1313]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q54873
      • conflict (5)
      • see remark 999 (28)
      • conflict (55)
      • engineered mutation (240)
      • conflict (328)
      • conflict (373)
      • conflict (536)
      • conflict (568)
    • PDB 1OJO
    Domains in SCOPe 2.08: d1ojoa1, d1ojoa2, d1ojoa3
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ojoA (A:)
asvkdtytdrlddwngiiagnqyydskndqmaklnqelegkvadslssissqadriylwe
kfsnyktsanltatyrkleemakqvtnpssryyqdetvvrtvrdsmewmhkhvynseksi
vgnwwdyeigtprainntlslmkeyfsdeeikkytdviekfvpdpehfrkttdnpfkalg
gnlvdmgrvkviagllrkddqeisstirsieqvfklvdqgegfyqdgsyidhtnvaytga
fgnvlidglsqllpviqktknpidkdkmqtmyhwidksfapllvngelmdmsrgrsisra
nseghvaavevlrgihriadmsegetkqrlqslvktivqsdsyydvfknlktykdislmq
sllsdagvasvprtsylsafnkmdktamynaekgfgfglslfssrtlnyehmnkenkrgw
ytsdgmfylyngdlshysdgywptvnpykmpgttetdakradsdtgkvlpsafvgtskld
danatatmdftnwnqtltahkswfmlkdkiaflgsniqntstdtaattidqrklessnpy
kvyvndkeaslteqekdypetqsvflessdskknigyfffkkssismskalqkgawkdin
egqsdkevenefltisqahkqnrdsygymlipnvdratfnqmikelessliennetlqsv
ydakqgvwgivkyddsvstisnqfqvlkrgvytirkegdeykiayynpetqesapdqevf
kkleqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojoA (A:)
vkdtytdrlddwngiiagnqyydskndqmaklnqelegkvadslssissqadriylwekf
snyktsanltatyrkleemakqvtnpssryyqdetvvrtvrdsmewmhkhvynseksivg
nwwdyeigtprainntlslmkeyfsdeeikkytdviekfvpdpehfrkttdnpfkalggn
lvdmgrvkviagllrkddqeisstirsieqvfklvdqgegfyqdgsyidhtnvaytgafg
nvlidglsqllpviqktknpidkdkmqtmyhwidksfapllvngelmdmsrgrsisrans
eghvaavevlrgihriadmsegetkqrlqslvktivqsdsyydvfknlktykdislmqsl
lsdagvasvprtsylsafnkmdktamynaekgfgfglslfssrtlnyehmnkenkrgwyt
sdgmfylyngdlshysdgywptvnpykmpgttetdakradsdtgkvlpsafvgtskldda
natatmdftnwnqtltahkswfmlkdkiaflgsniqntstdtaattidqrklessnpykv
yvndkeaslteqekdypetqsvflessdskknigyfffkkssismskalqkgawkdineg
qsdkevenefltisqahkqnrdsygymlipnvdratfnqmikelessliennetlqsvyd
akqgvwgivkyddsvstisnqfqvlkrgvytirkegdeykiayynpetqesapdqevfkk
le