PDB entry 1msw

View 1msw on RCSB PDB site
Description: Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase
Class: transcription/DNA/RNA
Keywords: T7RNAP elongation complex, TRANSCRIPTION/DNA/RNA COMPLEX
Deposited on 2002-09-19, released 2002-11-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-19.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.241
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'D':
    Compound: DNA-directed RNA polymerase
    Species: Enterobacteria phage T7 [TaxId:10760]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1mswd_
  • Chain 'N':
    Compound: Non-Tempate DNA
    Species: synthetic, synthetic
  • Chain 'R':
    Compound: RNA message
    Species: synthetic, synthetic
  • Chain 'T':
    Compound: Template DNA
    Species: synthetic, synthetic
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1mswD (D:)
mntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlk
agevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitik
ttlacltsadnttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykk
afmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhrqnagvvgqd
setielapeyaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrth
skkalmryedvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereel
pmkpedidmnpealtawkraaaavyrkdkarksrrislefmleqankfanhkaiwfpynm
dwrgrvyavsmfnpqgndmtkglltlakgkpigkegyywlkihgancagvdkvpfperik
fieenhenimacaksplentwwaeqdspfcflafcfeyagvqhhglsyncslplafdgsc
sgiqhfsamlrdevggravnllpsetvqdiygivakkvneilqadaingtdnevvtvtde
ntgeisekvklgtkalagqwlaygvtrsvtkrsvmtlaygskefgfrqqvledtiqpaid
sgkglmftqpnqaagymakliwesvsvtvvaaveamnwlksaakllaaevkdkktgeilr
krcavhwvtpdgfpvwqeykkpiqtrlnlmflgqfrlqptintnkdseidahkqesgiap
nfvhsqdgshlrktvvwahekygiesfalihdsfgtipadaanlfkavretmvdtyescd
vladfydqfadqlhesqldkmpalpakgnlnlrdilesdfafa

    Sequence, based on observed residues (ATOM records): (download) 
    >1mswD (D:)
ntiniakndfsdielaaipfntladhygerlareqlalehesyemgearfrkmferqlka
gevadnaaakplittllpkmiarindwfeevkakrgkrptafqflqeikpeavayitikt
tlacltsadnttvqavasaigraiedearfgrirdleakhfkknveeqlnkrvghvykka
fmqvveadmlskgllggeawsswhkedsihvgvrciemliestgmvslhrqsetielape
yaeaiatragalagispmfqpcvvppkpwtgitgggywangrrplalvrthskkalmrye
dvympevykainiaqntawkinkkvlavanvitkwkhcpvedipaiereelpmktawkra
aaavyrkdkarksrrislefmleqankfanhkaiwfpynmdwrgrvyavsmfnpqgndmt
kglltlakgkpigkegyywlkihgancagvdkvpfperikfieenhenimacaksplent
wwaeqdspfcflafcfeyagvqhhglsyncslplafdgscsgiqhfsamlrdevggravn
llpsetvqdiygivakkvneilqadaingtdnevvtvtdentgeisekvklgtkalagqw
laygvtrsvtkrsvmtlaygskefgfrqqvledtiqpaidsgkglmftqpnqaagymakl
iwesvsvtvvaaveamnwlksaakllaaevkdkktgeilrkrcavhwvtpdgfpvwqeyk
kpiqtrlnlmflgqfrlqptintnkdseidahkqesgiapnfvhsqdgshlrktvvwahe
kygiesfalihdsfgtipadaanlfkavretmvdtyescdvladfydqfadqlhesqldk
mpalpakgnlnlrdilesdfafa

  • Chain 'N':
    No sequence available.

  • Chain 'R':
    No sequence available.

  • Chain 'T':
    No sequence available.