PDB entry 1ma1

View 1ma1 on RCSB PDB site
Description: Structure and properties of the atypical iron superoxide dismutase from Methanobacterium thermoautotrophicum
Class: oxidoreductase
Keywords: iron superoxide dismutase, metal specificity, azide inhibition, peroxide inactivation, OXIDOREDUCTASE
Deposited on 2002-07-31, released 2002-08-21
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.215
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: superoxide dismutase
    Species: Methanothermobacter thermautotrophicus [TaxId:145262]
    Gene: SODF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ma1a1, d1ma1a2
  • Chain 'B':
    Compound: superoxide dismutase
    Species: Methanothermobacter thermautotrophicus [TaxId:145262]
    Gene: SODF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ma1b1, d1ma1b2
  • Chain 'C':
    Compound: superoxide dismutase
    Species: Methanothermobacter thermautotrophicus [TaxId:145262]
    Gene: SODF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ma1c1, d1ma1c2
  • Chain 'D':
    Compound: superoxide dismutase
    Species: Methanothermobacter thermautotrophicus [TaxId:145262]
    Gene: SODF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ma1d1, d1ma1d2
  • Chain 'E':
    Compound: superoxide dismutase
    Species: Methanothermobacter thermautotrophicus [TaxId:145262]
    Gene: SODF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ma1e1, d1ma1e2
  • Chain 'F':
    Compound: superoxide dismutase
    Species: Methanothermobacter thermautotrophicus [TaxId:145262]
    Gene: SODF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1ma1f1, d1ma1f2
  • Heterogens: FE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ma1A (A:)
mndlekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdt
dvdikaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkef
sqaaisaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnv
rpdyveafwnivnwkevekrfedil

    Sequence, based on observed residues (ATOM records): (download) 
    >1ma1A (A:)
ekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdtdvdi
kaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkefsqaa
isaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnvrpdy
veafwnivnwkevekrfedil

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ma1B (B:)
mndlekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdt
dvdikaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkef
sqaaisaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnv
rpdyveafwnivnwkevekrfedil

    Sequence, based on observed residues (ATOM records): (download) 
    >1ma1B (B:)
ekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdtdvdi
kaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkefsqaa
isaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnvrpdy
veafwnivnwkevekrfedil

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ma1C (C:)
mndlekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdt
dvdikaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkef
sqaaisaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnv
rpdyveafwnivnwkevekrfedil

    Sequence, based on observed residues (ATOM records): (download) 
    >1ma1C (C:)
ekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdtdvdi
kaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkefsqaa
isaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnvrpdy
veafwnivnwkevekrfedil

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ma1D (D:)
mndlekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdt
dvdikaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkef
sqaaisaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnv
rpdyveafwnivnwkevekrfedil

    Sequence, based on observed residues (ATOM records): (download) 
    >1ma1D (D:)
ekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdtdvdi
kaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkefsqaa
isaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnvrpdy
veafwnivnwkevekrfedil

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1ma1E (E:)
mndlekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdt
dvdikaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkef
sqaaisaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnv
rpdyveafwnivnwkevekrfedil

    Sequence, based on observed residues (ATOM records): (download) 
    >1ma1E (E:)
ekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdtdvdi
kaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkefsqaa
isaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnvrpdy
veafwnivnwkevekrfedil

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1ma1F (F:)
mndlekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdt
dvdikaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkef
sqaaisaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnv
rpdyveafwnivnwkevekrfedil

    Sequence, based on observed residues (ATOM records): (download) 
    >1ma1F (F:)
ekkfyelpelpypydalephisreqltihhqkhhqayvdganallrkldearesdtdvdi
kaalkelsfhvggyvlhlffwgnmgpadecggepsgklaeyiekdfgsferfrkefsqaa
isaegsgwavltycqrtdrlfimqvekhnvnviphfrillvldvwehayyidyrnvrpdy
veafwnivnwkevekrfedil