PDB entry 1lgh

View 1lgh on RCSB PDB site
Description: crystal structure of the light-harvesting complex II (b800-850) from rhodospirillum molischianum
Class: light harvesting complex
Keywords: light harvesting complex, bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism, membrane protein, photosynthesis
Deposited on 1996-03-20, released 1997-06-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.211
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: light harvesting complex II
  Species: Phaeospirillum molischianum [TaxId:1083]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P97253 (0-55)
  Domains in SCOPe 2.08: d1lgha_
• Chain 'B':
  Compound: light harvesting complex II
  Species: Phaeospirillum molischianum [TaxId:1083]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P95673 (Start-44)
  Domains in SCOPe 2.08: d1lghb_
• Chain 'D':
  Compound: light harvesting complex II
  Species: Phaeospirillum molischianum [TaxId:1083]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P97253 (0-55)
  Domains in SCOPe 2.08: d1lghd_
• Chain 'E':
  Compound: light harvesting complex II
  Species: Phaeospirillum molischianum [TaxId:1083]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P95673 (Start-44)
  Domains in SCOPe 2.08: d1lghe_
• Chain 'G':
  Compound: light harvesting complex II
  Species: Phaeospirillum molischianum [TaxId:1083]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P97253 (0-55)
  Domains in SCOPe 2.08: d1lghg_
• Chain 'H':
  Compound: light harvesting complex II
  Species: Phaeospirillum molischianum [TaxId:1083]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P95673 (Start-44)
  Domains in SCOPe 2.08: d1lghh_
• Chain 'J':
  Compound: light harvesting complex II
  Species: Phaeospirillum molischianum [TaxId:1083]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P97253 (0-55)
  Domains in SCOPe 2.08: d1lghj_
• Chain 'K':
  Compound: light harvesting complex II
  Species: Phaeospirillum molischianum [TaxId:1083]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P95673 (Start-44)
  Domains in SCOPe 2.08: d1lghk_
• Heterogens: BCL, LYC, DET, HTO, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1lghA (A:)
  snpkddykiwlvinpstwlpviwivatvvaiavhaavlaapgfnwialgaaksaak
  

  
  
• Chain 'B':
  Sequence, based on SEQRES records: (download)
  

  >1lghB (B:)
  aerslsglteeeaiavhdqfkttfsafiilaavahvlvwvwkpwf
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1lghB (B:)
  rslsglteeeaiavhdqfkttfsafiilaavahvlvwvwkpwf
  

  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1lghD (D:)
  snpkddykiwlvinpstwlpviwivatvvaiavhaavlaapgfnwialgaaksaak
  

  
  
• Chain 'E':
  Sequence, based on SEQRES records: (download)
  

  >1lghE (E:)
  aerslsglteeeaiavhdqfkttfsafiilaavahvlvwvwkpwf
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1lghE (E:)
  rslsglteeeaiavhdqfkttfsafiilaavahvlvwvwkpwf
  

  
  
• Chain 'G':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1lghG (G:)
  snpkddykiwlvinpstwlpviwivatvvaiavhaavlaapgfnwialgaaksaak
  

  
  
• Chain 'H':
  Sequence, based on SEQRES records: (download)
  

  >1lghH (H:)
  aerslsglteeeaiavhdqfkttfsafiilaavahvlvwvwkpwf
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1lghH (H:)
  rslsglteeeaiavhdqfkttfsafiilaavahvlvwvwkpwf
  

  
  
• Chain 'J':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >1lghJ (J:)
  snpkddykiwlvinpstwlpviwivatvvaiavhaavlaapgfnwialgaaksaak
  

  
  
• Chain 'K':
  Sequence, based on SEQRES records: (download)
  

  >1lghK (K:)
  aerslsglteeeaiavhdqfkttfsafiilaavahvlvwvwkpwf
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >1lghK (K:)
  rslsglteeeaiavhdqfkttfsafiilaavahvlvwvwkpwf