PDB entry 1f6d

View 1f6d on RCSB PDB site
Description: the structure of udp-n-acetylglucosamine 2-epimerase from e. coli.
Class: isomerase
Keywords: sugar-nucleotide epimerase, Rossmann fold, two domains, glycogen phosphorylase superfamily, UDP, dimer, ISOMERASE
Deposited on 2000-06-21, released 2000-12-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.198
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: udp-n-acetylglucosamine 2-epimerase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P27828 (0-375)
      • modified residue (0)
      • modified residue (15)
      • modified residue (41)
      • modified residue (60)
      • modified residue (142)
      • modified residue (184)
      • modified residue (206)
      • modified residue (279)
      • modified residue (306)
      • modified residue (348)
    Domains in SCOPe 2.08: d1f6da_
  • Chain 'B':
    Compound: udp-n-acetylglucosamine 2-epimerase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P27828 (0-375)
      • modified residue (0)
      • modified residue (15)
      • modified residue (41)
      • modified residue (142)
      • modified residue (184)
      • modified residue (206)
      • modified residue (279)
      • modified residue (306)
      • modified residue (348)
    Domains in SCOPe 2.08: d1f6db_
  • Chain 'C':
    Compound: udp-n-acetylglucosamine 2-epimerase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P27828 (0-End)
      • modified residue (0)
      • modified residue (15)
      • modified residue (41)
      • modified residue (142)
      • modified residue (184)
      • modified residue (206)
      • modified residue (279)
      • modified residue (306)
      • modified residue (348)
    Domains in SCOPe 2.08: d1f6dc_
  • Chain 'D':
    Compound: udp-n-acetylglucosamine 2-epimerase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P27828 (0-End)
      • modified residue (0)
      • modified residue (15)
      • modified residue (41)
      • modified residue (60)
      • modified residue (142)
      • modified residue (184)
      • modified residue (206)
      • modified residue (279)
      • modified residue (306)
      • modified residue (348)
    Domains in SCOPe 2.08: d1f6dd_
  • Heterogens: NA, CL, UDP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1f6dA (A:)
mkvltvfgtrpeaikmaplvhalakdpffeakvcvtaqhremldqvlklfsivpdydlni
mqpgqglteitcrileglkpilaefkpdvvlvhgdttttlatslaafyqripvghveagl
rtgdlyspwpeeanrtltghlamyhfsptetsrqnllrenvadsrifitgntvidallwv
rdqvmssdklrselaanypfidpdkkmilvtghrresfgrgfeeichaladiatthqdiq
ivypvhlnpnvrepvnrilghvknvilidpqeylpfvwlmnhawliltdsggiqeeapsl
gkpvlvmrdtterpeavtagtvrlvgtdkqriveevtrllkdeneyqamsrahnpygdgq
acsrilealknnrisl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1f6dB (B:)
mkvltvfgtrpeaikmaplvhalakdpffeakvcvtaqhremldqvlklfsivpdydlni
mqpgqglteitcrileglkpilaefkpdvvlvhgdttttlatslaafyqripvghveagl
rtgdlyspwpeeanrtltghlamyhfsptetsrqnllrenvadsrifitgntvidallwv
rdqvmssdklrselaanypfidpdkkmilvtghrresfgrgfeeichaladiatthqdiq
ivypvhlnpnvrepvnrilghvknvilidpqeylpfvwlmnhawliltdsggiqeeapsl
gkpvlvmrdtterpeavtagtvrlvgtdkqriveevtrllkdeneyqamsrahnpygdgq
acsrilealknnrisl

    Sequence, based on observed residues (ATOM records): (download) 
    >1f6dB (B:)
mkvltvfgtrpeaikmaplvhalakdpffeakvcvtaqhremldqvlklfsivpdydlni
qglteitcrileglkpilaefkpdvvlvhgdttttlatslaafyqripvghveaglrtgd
lyspwpeeanrtltghlamyhfsptetsrqnllrenvadsrifitgntvidallwvrdqv
mssdklrselaanypfidpdkkmilvtghrresfgrgfeeichaladiatthqdiqivyp
vhlnpnvrepvnrilghvknvilidpqeylpfvwlmnhawliltdsggiqeeapslgkpv
lvmrdtterpeavtagtvrlvgtdkqriveevtrllkdeneyqamsrahnpygdgqacsr
ilealknnrisl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1f6dC (C:)
mkvltvfgtrpeaikmaplvhalakdpffeakvcvtaqhremldqvlklfsivpdydlni
mqpgqglteitcrileglkpilaefkpdvvlvhgdttttlatslaafyqripvghveagl
rtgdlyspwpeeanrtltghlamyhfsptetsrqnllrenvadsrifitgntvidallwv
rdqvmssdklrselaanypfidpdkkmilvtghrresfgrgfeeichaladiatthqdiq
ivypvhlnpnvrepvnrilghvknvilidpqeylpfvwlmnhawliltdsggiqeeapsl
gkpvlvmrdtterpeavtagtvrlvgtdkqriveevtrllkdeneyqamsrahnpygdgq
acsrilealknnrisl

    Sequence, based on observed residues (ATOM records): (download) 
    >1f6dC (C:)
mkvltvfgtrpeaikmaplvhalakdpffeakvcvtaqhremldqvlklfsivpdydlni
gqglteitcrileglkpilaefkpdvvlvhgdttttlatslaafyqripvghveaglrtg
dlyspwpeeanrtltghlamyhfsptetsrqnllrenvadsrifitgntvidallwvrdq
vmssdklrselaanypfidpdkkmilvtghrfgrgfeeichaladiatthqdiqivypvh
lnpnvrepvnrilghvknvilidpqeylpfvwlmnhawliltdsggiqeeapslgkpvlv
mrdtterpeavtagtvrlvgtdkqriveevtrllkdeneyqamsrahnpygdgqacsril
ealknnr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1f6dD (D:)
mkvltvfgtrpeaikmaplvhalakdpffeakvcvtaqhremldqvlklfsivpdydlni
mqpgqglteitcrileglkpilaefkpdvvlvhgdttttlatslaafyqripvghveagl
rtgdlyspwpeeanrtltghlamyhfsptetsrqnllrenvadsrifitgntvidallwv
rdqvmssdklrselaanypfidpdkkmilvtghrresfgrgfeeichaladiatthqdiq
ivypvhlnpnvrepvnrilghvknvilidpqeylpfvwlmnhawliltdsggiqeeapsl
gkpvlvmrdtterpeavtagtvrlvgtdkqriveevtrllkdeneyqamsrahnpygdgq
acsrilealknnrisl

    Sequence, based on observed residues (ATOM records): (download) 
    >1f6dD (D:)
mkvltvfgtrpeaikmaplvhalakdpffeakvcvtaqhremldqvlklfsivpdydlni
mqpgqglteitcrileglkpilaefkpdvvlvhgdttttlatslaafyqripvghveagl
rtgdlyspwpeeanrtltghlamyhfsptetsrqnllrenvadsrifitgntvidallwv
rdqvmssdklrselaanypfidpdkkmilvtghrresfgrgfeeichaladiatthqdiq
ivypvhlnpnvrepvnrilghvknvilidpqeylpfvwlmnhawliltdsggiqeeapsl
gkpvlvmrdtterpeavtagtvrlvgtdkqriveevtrllkdeneyqamsrahnpygdgq
acsrilealknnri