PDB entry 1d7k

View 1d7k on RCSB PDB site
Description: crystal structure of human ornithine decarboxylase at 2.1 angstroms resolution
Class: lyase
Keywords: alpha-beta barrel, pyridoxal 5'-phosphate, sheet-domain, decarboxylation, ornithine, lyase
Deposited on 1999-10-18, released 2000-10-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.212
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: human ornithine decarboxylase
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11926 (0-420)
      • conflict (342)
      • conflict (408)
    Domains in SCOPe 2.07: d1d7ka1, d1d7ka2
  • Chain 'B':
    Compound: human ornithine decarboxylase
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11926 (0-End)
      • conflict (342)
      • conflict (408)
    Domains in SCOPe 2.07: d1d7kb1, d1d7kb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1d7kA (A:)
eefdchfldegftakdildqkinevsssddkdafyvadlgdilkkhlrwlkalprvtpfy
avkcndskaivktlaatgtgfdcaskteiqlvqslgvpperiiyanpckqvsqikyaann
gvqmmtfdsevelmkvarahpkaklvlriatddskavcrlsvkfgatlrtsrlllerake
lnidvvgvsfhvgsgctdpetfvqaisdarcvfdmgaevgfsmylldigggfpgsedvkl
kfeeitgvinpaldkyfpsdsgvriiaepgryyvasaftlavniiakkivlkeqtgsdde
desseqtfmyyvndgvygsfncilydhahvkpllqkrpkpderyysssiwgptcdgldri
vercdlpemhvgdwmlfenmgaytvaaastfngfqrptiyyvmsgpawqlmqqfqnpdfp
p

    Sequence, based on observed residues (ATOM records): (download) 
    >1d7kA (A:)
eefdchfldegftakdildqkinevsssddkdafyvadlgdilkkhlrwlkalprvtpfy
avkcndskaivktlaatgtgfdcaskteiqlvqslgvpperiiyanpckqvsqikyaann
gvqmmtfdsevelmkvarahpkaklvlriatddskavcrlsvkfgatlrtsrlllerake
lnidvvgvsfhvgsgctdpetfvqaisdarcvfdmgaevgfsmylldigggfpgsedvkl
kfeeitgvinpaldkyfpsdsgvriiaepgryyvasaftlavniiakkivlkeqteqtfm
yyvndgvygsfncilydhahvkpllqkrpkpderyysssiwgptcdgldrivercdlpem
hvgdwmlfenmgaytvaaastfngfqrptiyyvmsgpawqlmqqfqnpdfpp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1d7kB (B:)
eefdchfldegftakdildqkinevsssddkdafyvadlgdilkkhlrwlkalprvtpfy
avkcndskaivktlaatgtgfdcaskteiqlvqslgvpperiiyanpckqvsqikyaann
gvqmmtfdsevelmkvarahpkaklvlriatddskavcrlsvkfgatlrtsrlllerake
lnidvvgvsfhvgsgctdpetfvqaisdarcvfdmgaevgfsmylldigggfpgsedvkl
kfeeitgvinpaldkyfpsdsgvriiaepgryyvasaftlavniiakkivlkeqtgsdde
desseqtfmyyvndgvygsfncilydhahvkpllqkrpkpderyysssiwgptcdgldri
vercdlpemhvgdwmlfenmgaytvaaastfngfqrptiyyvmsgpawqlmqqfqnpdfp
p

    Sequence, based on observed residues (ATOM records): (download) 
    >1d7kB (B:)
eefdchfldegftakdildqkinevsssddkdafyvadlgdilkkhlrwlkalprvtpfy
avkcndskaivktlaatgtgfdcaskteiqlvqslgvpperiiyanpckqvsqikyaann
gvqmmtfdsevelmkvarahpkaklvlriatddskavcrlsvkfgatlrtsrlllerake
lnidvvgvsfhvgsgctdpetfvqaisdarcvfdmgaevgfsmylldigggfpgsedvkl
kfeeitgvinpaldkyfpsdsgvriiaepgryyvasaftlavniiakkivlkeqsseqtf
myyvndgvygsfncilydhahvkpllqkrpkpderyysssiwgptcdgldrivercdlpe
mhvgdwmlfenmgaytvaaastfngfqrptiyyvmsgpawqlmqqfq