PDB entry 1aym

View 1aym on RCSB PDB site
Description: human rhinovirus 16 coat protein at high resolution
Class: Virus
Keywords: HUMAN RHINOVIRUS 16, RNA, SITE-DIRECTED MUTAGENESIS, RHINOVIRUS COAT PROTEIN, Icosahedral virus
Deposited on 1997-11-06, released 1998-01-21
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.23
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: human rhinovirus 16 coat protein
    Species: Human rhinovirus sp. [TaxId:169066]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1aym1_
  • Chain '2':
    Compound: human rhinovirus 16 coat protein
    Species: Human rhinovirus sp. [TaxId:169066]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1aym.1
  • Chain '3':
    Compound: human rhinovirus 16 coat protein
    Species: Human rhinovirus sp. [TaxId:169066]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1aym3_
  • Chain '4':
    Compound: human rhinovirus 16 coat protein
    Species: Human rhinovirus sp. [TaxId:169066]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1aym.1
  • Heterogens: ZN, MYR, DAO, HOH

PDB Chain Sequences:

  • Chain '1':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1aym1 (1:)
npveryvdevlnevlvvpninqshpttsnaapvldaaetghtnkiqpedtietryvqssq
tldemsvesflgrsgcihesvldivdnyndqsftkwninlqemaqirrkfemftyarfds
eitmvpsvaakdghighivmqymyvppgapipttrddyawqsgtnasvfwqhgqpfprfs
lpflsiasayymfydgydgdtyksrygtvvtndmgtlcsrivtseqlhkvkvvtriyhka
khtkawcprppravqyshthttnyklssevhndvairprtnlttv

  • Chain '2':
    Sequence, based on SEQRES records: (download) 
    >1aym2 (2:)
spsveacgysdriiqitrgdstitsqdvanavvgygvwphyltpqdataidkptqpdtss
nrfytldskmwnstskgwwwklpdalkdmgifgenmfyhflgrsgytvhvqcnaskfhqg
tllvvmipehqlatvnkgnvnagykythpgeagrevgtqvenekqpsddnwlnfdgtllg
nllifphqfinlrsnnsatlivpyvnavpmdsmvrhnnwslviipvcqlqsnnisnivpi
tvsispmcaefsgaraktvvq

    Sequence, based on observed residues (ATOM records): (download) 
    >1aym2 (2:)
sdriiqitrgdstitsqdvanavvgygvwphyltpqdataidkptqpdtssnrfytldsk
mwnstskgwwwklpdalkdmgifgenmfyhflgrsgytvhvqcnaskfhqgtllvvmipe
hqlatvnkgnvnagykythpgeagrevgtqvenekqpsddnwlnfdgtllgnllifphqf
inlrsnnsatlivpyvnavpmdsmvrhnnwslviipvcqlqsnnisnivpitvsispmca
efsgaraktvvq

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1aym3 (3:)
glpvyvtpgsgqfmttddmqspcalpwyhptkeifipgevknliemcqvdtlipinstqs
nignvsmytvtlspqtklaeeifaikvdiashplattligeiasyfthwtgslrfsfmfc
gtanttlkvllaytppgigkprsrkeamlgthvvwdvglqstvslvvpwisasqyrfttp
dtyssagyitcwyqtnfvvppntpntaemlcfvsgckdfclrmardtdlhkqtgpitq

  • Chain '4':
    Sequence, based on SEQRES records: (download) 
    >1aym4 (4:)
gaqvsrqnvgthstqnmvsngsslnyfninyfkdaassgasrldfsqdpskftdpvkdvl
ekgiptlq

    Sequence, based on observed residues (ATOM records): (download) 
    >1aym4 (4:)
gaqvsrqslnyfninyfkdaassgasrld