SPACI score report for 2cdt in ASTRAL 2.07:

PDB Entry: 2cdt
SPACI score: 0.26
AEROSPACI score: 0.26 (mutant; see below)

Experiment type: XRAY
Resolution: 2.54
R-factor: 0.248
PCK1 PROCHECK Ramachandran: 1
PCK2 PROCHECK Chi-1 angle: 2
PCK3 PROCHECK H-bonds: 2
WCK1 WHAT_CHECK Packing: 0.388
WCK2 WHAT_CHECK Ramachandran: -2.887
WCK3 WHAT_CHECK Chi angles: -3.116
WCK4 WHAT_CHECK Backbone: 0.32

The AEROSPACI score for this entry is lower than the SPACI score because human-curated comments on the entry in SCOPe contain the phrase mutant. The full comment is: "mutant; automatically matched to d1pwt__; automated match to d1pwt__"

Note: Here are links to pages about PROCHECK and WHAT_CHECK.

Here is the full WHAT_CHECK report on this protein (linked from the WHAT_CHECK site).