SCOPe 2.08: Domain d1q87a1: 1q87 A:147-341

Lineage for d1q87a1 (1q87 A:147-341)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.47: 39 kda initiator binding protein, IBP39, C-terminal domains [103408] (1 superfamily)
   2 closely associated domains: (1) all-alpha, EF-hand like; (2) alpha+beta, Frataxin-like

4. Superfamily e.47.1: 39 kda initiator binding protein, IBP39, C-terminal domains [103409] (1 family)
   automatically mapped to Pfam PF11422

5. Family e.47.1.1: 39 kda initiator binding protein, IBP39, C-terminal domains [103410] (1 protein)

6. Protein 39 kda initiator binding protein, IBP39, C-terminal domains [103411] (1 species)

7. Species Trichomonas vaginalis [TaxId:5722] [103412] (3 PDB entries)

8. Domain d1q87a1: 1q87 A:147-341 [96192]
   Other proteins in same PDB: d1q87a2, d1q87b2

Details for d1q87a1

PDB Entry: 1q87, 2.32 Å

PDB Description: Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (tetragonal form)

PDB Compounds: (A:) 39 kDa initiator binding protein

SCOPe Domain Sequences for d1q87a1:

Sequence, based on SEQRES records:

>d1q87a1 e.47.1.1 (A:147-341) 39 kda initiator binding protein, IBP39, C-terminal domains {Trichomonas vaginalis [TaxId: 5722]}
smcignstpneqetfrakvdeiwfrltqktdgtvmrdfliekaaeyfkqpeqpkqnaiev
isaimapqeeqtkskadlykflamfgpyetimlkiaslllisnnkghwltfdpqaeknan
nqrdsisgwfdqnepnclilktptgirkiwnkplieatgqylmdengekydswdkyfemk
pietyltayptfapm

Sequence, based on observed residues (ATOM records):

>d1q87a1 e.47.1.1 (A:147-341) 39 kda initiator binding protein, IBP39, C-terminal domains {Trichomonas vaginalis [TaxId: 5722]}
smcignstpneqetfrakvdeiwfrltqktdgtvmrdfliekaaeyfkqpeqpkqnaiev
isaimapqeeqtkskadlykflamfgpyetimlkiaslllisnnkghwltfdpqdsisgw
fdqnepnclilktptgirkiwnkplieatgqylmdengekydswdkyfemkpiayptfap
m

Timeline for d1q87a1:

• d1q87a1 first appeared in SCOP 1.67, called d1q87a_
  
• d1q87a1 appears in SCOPe 2.07