Lineage for d1q87b1 (1q87 B:147-341)

  1. Root: SCOPe 2.07
  2. 2568173Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2574628Fold e.47: 39 kda initiator binding protein, IBP39, C-terminal domains [103408] (1 superfamily)
    2 closely associated domains: (1) all-alpha, EF-hand like; (2) alpha+beta, Frataxin-like
  4. 2574629Superfamily e.47.1: 39 kda initiator binding protein, IBP39, C-terminal domains [103409] (1 family) (S)
    automatically mapped to Pfam PF11422
  5. 2574630Family e.47.1.1: 39 kda initiator binding protein, IBP39, C-terminal domains [103410] (1 protein)
  6. 2574631Protein 39 kda initiator binding protein, IBP39, C-terminal domains [103411] (1 species)
  7. 2574632Species Trichomonas vaginalis [TaxId:5722] [103412] (3 PDB entries)
  8. 2574636Domain d1q87b1: 1q87 B:147-341 [96193]
    Other proteins in same PDB: d1q87a2, d1q87b2

Details for d1q87b1

PDB Entry: 1q87 (more details), 2.32 Å

PDB Description: Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (tetragonal form)
PDB Compounds: (B:) 39 kDa initiator binding protein

SCOPe Domain Sequences for d1q87b1:

Sequence, based on SEQRES records: (download)

>d1q87b1 e.47.1.1 (B:147-341) 39 kda initiator binding protein, IBP39, C-terminal domains {Trichomonas vaginalis [TaxId: 5722]}
smcignstpneqetfrakvdeiwfrltqktdgtvmrdfliekaaeyfkqpeqpkqnaiev
isaimapqeeqtkskadlykflamfgpyetimlkiaslllisnnkghwltfdpqaeknan
nqrdsisgwfdqnepnclilktptgirkiwnkplieatgqylmdengekydswdkyfemk
pietyltayptfapm

Sequence, based on observed residues (ATOM records): (download)

>d1q87b1 e.47.1.1 (B:147-341) 39 kda initiator binding protein, IBP39, C-terminal domains {Trichomonas vaginalis [TaxId: 5722]}
smcignstpneqetfrakvdeiwfrltqktdgtvmrdfliekaaeyfkqpeqpkqnaiev
isaimapqeeqtkskadlykflamfgpyetimlkiaslllisnnkghwltfdpqaeknas
isgwfdqnepnclilktptgirkiwnkplieatgqylmdengekydswdkyfemkpiety
ltayptfapm

SCOPe Domain Coordinates for d1q87b1:

Click to download the PDB-style file with coordinates for d1q87b1.
(The format of our PDB-style files is described here.)

Timeline for d1q87b1:

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Domains from same chain:
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d1q87b2