SCOPe 2.08: Domain d1pqya1: 1pqy A:4-418

Lineage for d1pqya1 (1pqy A:4-418)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.123: CoA-transferase family III (CaiB/BaiF) [89795] (1 superfamily)
   consist of two different alpha/beta domains; N-terminal domain has a SurE-like topology with a left-handed beta-alpha-beta unit

4. Superfamily c.123.1: CoA-transferase family III (CaiB/BaiF) [89796] (2 families)

5. Family c.123.1.1: CoA-transferase family III (CaiB/BaiF) [89797] (5 proteins)
   forms interlocked homodimer of two ring-like subunits

6. Protein Hypothetical protein YfdW [102709] (1 species)

7. Species Escherichia coli [TaxId:562] [102710] (6 PDB entries)

8. Domain d1pqya1: 1pqy A:4-418 [95041]
   Other proteins in same PDB: d1pqya2, d1pqya3
   structural genomics

Details for d1pqya1

PDB Entry: 1pqy, 2.35 Å

PDB Description: crystal structure of formyl-coa transferase yfdw from e. coli

PDB Compounds: (A:) Hypothetical protein yfdW

SCOPe Domain Sequences for d1pqya1:

Sequence, based on SEQRES records:

>d1pqya1 c.123.1.1 (A:4-418) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}
stplqgikvldftgvqsgpsctqmlawfgadvikierpgvgdvtrhqlrdipdidalyft
mlnsnkrsielntktaegkevmeklireadilvenfhpgaidhmgftwehiqeinprlif
gsikgfdecspyvnvkayenvaqaaggaasttgfwdgpplvsaaalgdsntgmhlligll
aallhrektgrgqrvtmsmqdavlnlcrvklrdqqrldklgyleeypqypngtfgdavpr
ggnaggggqpgwilkckgwetdpnayiyftiqeqnwentckaigkpewitdpaystahar
qphifdifaeiekytvtidkheavayltqfdipcapvlsmkeisldpslrqsgsvveveq
plrgkyltvgcpmkfsaftpdikaapllgehtaavlqelgysddeiaamkqnhai

Sequence, based on observed residues (ATOM records):

>d1pqya1 c.123.1.1 (A:4-418) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}
stplqgikvldftgvqsgpsctqmlawfgadvikierpgvgdvtrhqlrdipdidalyft
mlnsnkrsielntktaegkevmeklireadilvenfhpggftwehiqeinprlifgsikg
fdecspyvnvkayenvaqaaggaasttgfwdgpplvsaaalgdsntgmhlligllaallh
rektgrgqrvtmsmqdavlnlcrvklrdqqrldklgyleeypqypngtfgdavprggnag
gggqpgwilkckgwetdpnayiyftiqeqnwentckaigkpewitdpaystaharqphif
difaeiekytvtidkheavayltqfdipcapvlsmkeisldpslrqsgsvveveqplrgk
yltvgcpmkfsaftpdikaapllgehtaavlqelgysddeiaamkqnhai

Timeline for d1pqya1:

• d1pqya1 first appeared in SCOP 1.67, called d1pqya_
  
• d1pqya1 appears in SCOPe 2.07