SCOPe 2.07: Domain d1oyrd1: 1oyr D:1-151

Lineage for d1oyrd1 (1oyr D:1-151)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
   core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover

4. Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)

5. Family d.14.1.4: Ribonuclease PH domain 1-like [54229] (11 proteins)

6. Protein Ribonuclease PH, domain 1 [102758] (4 species)

7. Species Bacillus subtilis [TaxId:1423] [102761] (3 PDB entries)

8. Domain d1oyrd1: 1oyr D:1-151 [93752]
   Other proteins in same PDB: d1oyra2, d1oyrb2, d1oyrc2, d1oyrd2, d1oyre2, d1oyrf2
   complexed with cd, so4

Details for d1oyrd1

PDB Entry: 1oyr, 3.1 Å

PDB Description: Crystal structure of the phosphorolytic exoribonuclease RNase PH from Bacillus subtilis

PDB Compounds: (D:) Ribonuclease PH

SCOPe Domain Sequences for d1oyrd1:

Sequence; same for both SEQRES and ATOM records:

>d1oyrd1 d.14.1.4 (D:1-151) Ribonuclease PH, domain 1 {Bacillus subtilis [TaxId: 1423]}
mrhdgrqhdelrpitfdldfishpegsvlitagntkvicnasvedrvppflrgggkgwit
aeysmlpratnqrtiresskgkisgrtmeiqrligralravvdleklgertiwidcdviq
adggtrtasitgaflamaiaigklikagtik

Timeline for d1oyrd1:

• d1oyrd1 first appeared in SCOP 1.67
  
• d1oyrd1 appears in SCOPe 2.06
  
• d1oyrd1 appears in the current release, SCOPe 2.08