Lineage for d1m3id_ (1m3i D:)

  1. Root: SCOPe 2.07
  2. 2626587Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2628400Fold f.9: Perfringolysin [56977] (1 superfamily)
    2 domains: (1) alpha+beta; (2) all-beta, similar to the CalB domain fold but the two last strands are transposed
  4. 2628401Superfamily f.9.1: Perfringolysin [56978] (2 families) (S)
    automatically mapped to Pfam PF01289
  5. 2628402Family f.9.1.1: Perfringolysin [56979] (2 proteins)
  6. 2628403Protein Perfringolysin [56980] (2 species)
  7. 2628404Species Clostridium perfringens [TaxId:1502] [56981] (3 PDB entries)
  8. 2628409Domain d1m3id_: 1m3i D: [91181]

Details for d1m3id_

PDB Entry: 1m3i (more details), 2.9 Å

PDB Description: Perfringolysin O, new crystal form
PDB Compounds: (D:) perfringolysin O

SCOPe Domain Sequences for d1m3id_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1m3id_ f.9.1.1 (D:) Perfringolysin {Clostridium perfringens [TaxId: 1502]}
qsidsgisslsynrnevlasngdkiesfvpkegkkagnkfivverqkrslttspvdisii
dsvndrtypgalqladkalvenrptilmvkrkpininidlpglkgensikvddptygkvs
gaidelvskwnekyssthtlpartqysesmvysksqissalnvnakvlenslgvdfnava
nnekkvmilaykqifytvsadlpknpsdlfddsvtfndlkqkgvsneapplmvsnvaygr
tiyvklettssskdvqaafkalikntdiknsqqykdiyenssftavvlggdaqehnkvvt
kdfdeirkvikdnatfstknpaypisytsvflkdnsvaavhnktdyiettsteyskgkin
ldhsgayvaqfevawdevsydkegnevlthktwdgnyqdktahystvipleanarnirik
arectglawewwrdviseydvpltnninvsiwgttlypgssityn

SCOPe Domain Coordinates for d1m3id_:

Click to download the PDB-style file with coordinates for d1m3id_.
(The format of our PDB-style files is described here.)

Timeline for d1m3id_: