SCOPe 2.04: Domain d1h3mb_: 1h3m B:

Lineage for d1h3mb_ (1h3m B:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.13: Cytidylytransferase [68901] (7 proteins)

6. Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) [64140] (4 species)

7. Species Escherichia coli [TaxId:562] [64141] (6 PDB entries)

8. Domain d1h3mb_: 1h3m B: [90601]
   complexed with cl, n2p

Details for d1h3mb_

PDB Entry: 1h3m, 2.4 Å

PDB Description: structure of 4-diphosphocytidyl-2c-methyl-d-erythritol synthetase

PDB Compounds: (B:) 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase

SCOPe Domain Sequences for d1h3mb_:

Sequence, based on SEQRES records:

>d1h3mb_ c.68.1.13 (B:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]}
hldvcavvpaagfgrrmqtecpkqylsignqtilehsvhallahprvkrvviaispgdsr
faqlplanhpqitvvdggderadsvltglkaagdaqwvlvhdaarpclhqddlarllals
etsrtggilaapvrdtmkraepgknaiahtvdrnglwhaltpqffprellhdcltralne
gatitdeasaleycgfhpqlvegradnikvtrpedlalaefyltr

Sequence, based on observed residues (ATOM records):

>d1h3mb_ c.68.1.13 (B:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]}
hldvcavvpaagecpkqylsignqtilehsvhallahprvkrvviaispgdsrfaqlpla
nhpqitvvdggderadsvltglkaagdaqwvlvhdaarpclhqddlarllalsetsrtgg
ilaapvrdtmkraepgknaiahtvdrnglwhaltpqffprellhdcltralnegatitde
asaleycgfhpqlvegradnikvtrpedlalaefyltr

Timeline for d1h3mb_:

• d1h3mb_ first appeared in SCOP 1.67
  
• d1h3mb_ appears in SCOPe 2.03
  
• d1h3mb_ appears in SCOPe 2.05
  
• d1h3mb_ appears in the current release, SCOPe 2.08