SCOP 1.75: Domain d1ofda2: 1ofd A:431-1239

Lineage for d1ofda2 (1ofd A:431-1239)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (1 family)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (18 proteins)

6. Protein Alpha subunit of glutamate synthase, central and FMN domains [69381] (2 species)
   Central domain (residues 423-780) may be a rudiment form of the FMN domain

7. Species Synechocystis sp. [TaxId:1143] [75055] (5 PDB entries)

8. Domain d1ofda2: 1ofd A:431-1239 [86936]
   Other proteins in same PDB: d1ofda1, d1ofda3, d1ofdb1, d1ofdb3

Details for d1ofda2

PDB Entry: 1ofd, 2 Å

PDB Description: glutamate synthase from synechocystis sp in complex with 2-oxoglutarate at 2.0 angstrom resolution

PDB Compounds: (A:) ferredoxin-dependent glutamate synthase 2

SCOP Domain Sequences for d1ofda2:

Sequence, based on SEQRES records:

>d1ofda2 c.1.4.1 (A:431-1239) Alpha subunit of glutamate synthase, central and FMN domains {Synechocystis sp. [TaxId: 1143]}
faektlfndaqtvlqqqaafgytaedvemvvvpmasqgkeptfcmgddtplavlshkprl
lydyfkqrfaqvtnppidplrenlvmslamflgkrgnllepkaesartiklrsplvneve
lqaiktgqlqvaevstlydldgvnsledaltnlvktaiatvqagaeilvltdrpngailt
enqsfippllavgavhhhliraglrlkaslivdtaqcwsthhfaclvgygasaicpylal
esvrqwwldektqklmengrldridlptalknyrqsveaglfkilskmgisllasyhgaq
ifeaiglgaelveyafagttsrvggltiadvagevmvfhgmafpemakklenfgfvnyrp
ggeyhmnspemskslhkavaaykvggngnngeaydhyelyrqylkdrpvtalrdlldfna
dqpaisleevesvesivkrfctggmslgalsreahetlaiamnrlgaksnsgeggedvvr
yltlddvdsegnsptlphlhglqngdtansaikqiasgrfgvtpeylmsgkqleikmaqg
akpgeggqlpgkkvseyiamlrrskpgvtlisppphhdiysiedlaqliydlhqinpeaq
vsvklvaeigigtiaagvakanadiiqisghdggtgasplssikhagspwelgvtevhrv
lmenqlrdrvllradgglktgwdvvmaalmgaeeygfgsiamiaegcimarvchtnncpv
gvatqqerlrqrfkgvpgqvvnffyfiaeevrsllahlgyrslddiigrtdllkvrsdvq
lsktqnltldcllnlpdtkqnrqwlnhep

Sequence, based on observed residues (ATOM records):

>d1ofda2 c.1.4.1 (A:431-1239) Alpha subunit of glutamate synthase, central and FMN domains {Synechocystis sp. [TaxId: 1143]}
faektlfndaqtvlqqqaafgytaedvemvvvpmasqgkeptfcmgddtplavlshkprl
lydyfkqrfaqvtnppidplrenlvmslamflgkrgnllepkaesartiklrsplvneve
lqaiktgqlqvaevstlydldgvnsledaltnlvktaiatvqagaeilvltdrpngailt
enqsfippllavgavhhhliraglrlkaslivdtaqcwsthhfaclvgygasaicpylal
esvrqwwldektqklmengrldridlptalknyrqsveaglfkilskmgisllasyhgaq
ifeaiglgaelveyafagttsrvggltiadvagevmvfhgmafkklenfgfvnyrpggey
hmnspemskslhkavaaydhyelyrqylkdrpvtalrdlldfnadqpaisleevesvesi
vkrfctggmslgalsreahetlaiamnrlgaksnsgeggedvvryltlddvdsegnsptl
phlhglqngdtansaikqiasgrfgvtpeylmsgkqleikmaqgakpgeggqlpgkkvse
yiamlrrskpgvtlisppphhdiysiedlaqliydlhqinpeaqvsvklvaeigigtiaa
gvakanadiiqisghdggtgasplssikhagspwelgvtevhrvlmenqlrdrvllradg
glktgwdvvmaalmgaeeygfgsiamiaegcimarvchtnncpvgvatqqerlrqrfkgv
pgqvvnffyfiaeevrsllahlgyrslddiigrtdllkvrsdvqlsktqnltldcllnlp
dtkqnrqwlnhep

Timeline for d1ofda2:

• d1ofda2 first appeared in SCOP 1.65
  
• d1ofda2 appears in SCOP 1.73
  
• d1ofda2 appears in SCOPe 2.01
  
• d1ofda2 appears in the current release, SCOPe 2.08