SCOPe 2.01: Domain d1ofda1: 1ofd A:1240-1507

Lineage for d1ofda1 (1ofd A:1240-1507)

1. Root: SCOPe 2.01

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
   superhelix turns are made of parallel beta-strands and (short) turns

4. Superfamily b.80.4: Alpha subunit of glutamate synthase, C-terminal domain [69336] (1 family)

5. Family b.80.4.1: Alpha subunit of glutamate synthase, C-terminal domain [69337] (1 protein)
   this is a repeat family; one repeat unit is 1ea0 A:1280-1300 found in domain

6. Protein Alpha subunit of glutamate synthase, C-terminal domain [69338] (2 species)
   Central domain (residues 423-780) may be a rudiment form of the FMN domain

7. Species Synechocystis sp. [TaxId:1143] [75027] (5 PDB entries)

8. Domain d1ofda1: 1ofd A:1240-1507 [86935]
   Other proteins in same PDB: d1ofda2, d1ofda3, d1ofdb2, d1ofdb3
   complexed with akg, f3s, fmn

Details for d1ofda1

PDB Entry: 1ofd, 2 Å

PDB Description: glutamate synthase from synechocystis sp in complex with 2-oxoglutarate at 2.0 angstrom resolution

PDB Compounds: (A:) ferredoxin-dependent glutamate synthase 2

SCOPe Domain Sequences for d1ofda1:

Sequence; same for both SEQRES and ATOM records:

>d1ofda1 b.80.4.1 (A:1240-1507) Alpha subunit of glutamate synthase, C-terminal domain {Synechocystis sp. [TaxId: 1143]}
vhsngpvldddiladpdiqeainhqttatktyrlvntdrtvgtrlsgaiakkygnngfeg
nitlnfqgaagqsfgafnldgmtlhlqgeandyvgkgmnggeivivphpqasfapednvi
igntclygatggnlyangragerfavrnsvgkaviegagdhcceymtggvivvlgpvgrn
vgagmtgglayfldevgdlpekinpeiitlqritaskgeeqlkslitahvehtgspkgka
ilanwsdylgkfwqavppsekdspeann

Timeline for d1ofda1:

• d1ofda1 first appeared in SCOP 1.65
  
• d1ofda1 appears in SCOP 1.75
  
• d1ofda1 appears in SCOPe 2.02
  
• d1ofda1 appears in the current release, SCOPe 2.08