SCOPe 2.04: Domain d1nywb_: 1nyw B:

Lineage for d1nywb_ (1nyw B:)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.1: RmlC-like cupins [51182] (25 families)

5. Family b.82.1.1: dTDP-sugar isomerase [51183] (5 proteins)

6. Protein dTDP-4-dehydrorhamnose 3,5-epimerase RmlC [51184] (6 species)
   synonym: dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase

7. Species Streptococcus suis [TaxId:1307] [89402] (4 PDB entries)

8. Domain d1nywb_: 1nyw B: [86430]
   complexed with dau

Details for d1nywb_

PDB Entry: 1nyw, 1.6 Å

PDB Description: The high resolution structures of RmlC from Streptoccus suis in complex with dTDP-D-glucose

PDB Compounds: (B:) dtdp-6-deoxy-d-xylo-4-hexulose 3,5-epimerase

SCOPe Domain Sequences for d1nywb_:

Sequence; same for both SEQRES and ATOM records:

>d1nywb_ b.82.1.1 (B:) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC {Streptococcus suis [TaxId: 1307]}
enffgktlaarpveaipgmlefdipvhgdnrgwfkenfqkekmlplgfpesffaegklqn
nvsfsrknvlrglhaepwdkyisvadggkvlgtwvdlregetfgntyqtvidasksifvp
rgvangfqvlsdfvaysylvndywalelkpkyafvnyadpsldikwenleeaevseaden
hpflkdvkplrkedl

Timeline for d1nywb_:

• d1nywb_ first appeared in SCOP 1.65
  
• d1nywb_ appears in SCOPe 2.03
  
• d1nywb_ appears in SCOPe 2.05
  
• d1nywb_ appears in the current release, SCOPe 2.08