SCOPe 2.08: Domain d1nxzb2: 1nxz B:74-245

Lineage for d1nxzb2 (1nxz B:74-245)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.116: alpha/beta knot [75216] (1 superfamily)
   core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot

4. Superfamily c.116.1: alpha/beta knot [75217] (9 families)
   known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
   all known members have dimeric structures

5. Family c.116.1.5: YggJ C-terminal domain-like [89632] (4 proteins)
   contains extra strand (3) in the parallel beta-sheet, order 321546; similar dimerisation to the MTH1 domain

6. Protein Hypothetical protein HI0303 [89633] (1 species)

7. Species Haemophilus influenzae [TaxId:727] [89634] (2 PDB entries)

8. Domain d1nxzb2: 1nxz B:74-245 [86394]
   Other proteins in same PDB: d1nxza1, d1nxza3, d1nxzb1, d1nxzb3
   structural genomics

Details for d1nxzb2

PDB Entry: 1nxz, 2 Å

PDB Description: X-Ray Crystal Structure of Protein yggj_haein of Haemophilus influenzae. Northeast Structural Genomics Consortium Target IR73.

PDB Compounds: (B:) Hypothetical protein HI0303

SCOPe Domain Sequences for d1nxzb2:

Sequence; same for both SEQRES and ATOM records:

>d1nxzb2 c.116.1.5 (B:74-245) Hypothetical protein HI0303 {Haemophilus influenzae [TaxId: 727]}
keshlkihlgqvisrgermeftiqksvelgvnvitplwsercgvkldaermdkkiqqwqk
iaiaaceqcgrnivpeirplmklqdwcaendgalklnlhprahysiktlptipaggvrll
igsegglsaqeiaqteqqgfteillgkrvlrtetaslaaisalqicfgdlge

Timeline for d1nxzb2:

• d1nxzb2 first appeared in SCOP 1.65
  
• d1nxzb2 appears in SCOPe 2.07