Lineage for d1gqqb3 (1gqq B:107-321)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2154413Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 2154986Superfamily c.72.2: MurD-like peptide ligases, catalytic domain [53623] (3 families) (S)
    has extra strand located between strands 1 and 2
  5. 2154987Family c.72.2.1: MurCDEF [53624] (5 proteins)
    automatically mapped to Pfam PF08245
  6. 2154992Protein UDP-N-acetylmuramate-alanine ligase MurC [82520] (2 species)
  7. 2154993Species Haemophilus influenzae [TaxId:727] [89776] (4 PDB entries)
  8. 2155001Domain d1gqqb3: 1gqq B:107-321 [83304]
    Other proteins in same PDB: d1gqqa1, d1gqqa2, d1gqqb1, d1gqqb2

Details for d1gqqb3

PDB Entry: 1gqq (more details), 3.1 Å

PDB Description: murc - crystal structure of the apo-enzyme from haemophilus influenzae
PDB Compounds: (B:) udp-n-acetylmuramate-l-alanine ligase

SCOPe Domain Sequences for d1gqqb3:

Sequence, based on SEQRES records: (download)

>d1gqqb3 c.72.2.1 (B:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

Sequence, based on observed residues (ATOM records): (download)

>d1gqqb3 c.72.2.1 (B:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

SCOPe Domain Coordinates for d1gqqb3:

Click to download the PDB-style file with coordinates for d1gqqb3.
(The format of our PDB-style files is described here.)

Timeline for d1gqqb3: