SCOPe 2.02: Domain d1gqqb2: 1gqq B:322-475

Lineage for d1gqqb2 (1gqq B:322-475)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.59: MurD-like peptide ligases, peptide-binding domain [53243] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the rest

4. Superfamily c.59.1: MurD-like peptide ligases, peptide-binding domain [53244] (2 families)

5. Family c.59.1.1: MurCDEF C-terminal domain [53245] (4 proteins)

6. Protein UDP-N-acetylmuramate-alanine ligase MurC [82452] (2 species)

7. Species Haemophilus influenzae [TaxId:727] [89727] (4 PDB entries)

8. Domain d1gqqb2: 1gqq B:322-475 [83303]
   Other proteins in same PDB: d1gqqa1, d1gqqa3, d1gqqb1, d1gqqb3

Details for d1gqqb2

PDB Entry: 1gqq, 3.1 Å

PDB Description: murc - crystal structure of the apo-enzyme from haemophilus influenzae

PDB Compounds: (B:) udp-n-acetylmuramate-l-alanine ligase

SCOPe Domain Sequences for d1gqqb2:

Sequence; same for both SEQRES and ATOM records:

>d1gqqb2 c.59.1.1 (B:322-475) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
gagrrfdqlgefirpngkvrlvddyghhptevgvtikaaregwgdkrivmifqphrysrt
rdlfddfvqvlsqvdalimldvyaageapivgadskslcrsirnlgkvdpilvsdtsqlg
dvldqiiqdgdlilaqgagsvskisrglaeswkn

Timeline for d1gqqb2:

• d1gqqb2 first appeared in SCOP 1.65
  
• d1gqqb2 appears in SCOPe 2.01
  
• d1gqqb2 appears in SCOPe 2.03
  
• d1gqqb2 appears in the current release, SCOPe 2.08