SCOPe 2.03: Domain d1h8t.1: 1h8t D:,B:

Lineage for d1h8t.1 (1h8t D:,B:)

1. Root: SCOPe 2.03

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
   the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
   there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

6. Protein Human enterovirus B coat proteins [88635] (4 species)

7. Species Human echovirus 11 [TaxId:12078] [74890] (3 PDB entries)

8. Domain d1h8t.1: 1h8t D:,B: [83061]
   complexed with doa, myr

Details for d1h8t.1

PDB Entry: 1h8t, 2.9 Å

PDB Description: Echovirus 11

PDB Compounds: (B:) echovirus 11 coat protein vp2, (D:) echovirus 11 coat protein vp4

SCOPe Domain Sequences for d1h8t.1:

Sequence, based on SEQRES records:

>g1h8t.1 b.121.4.1 (D:,B:) Human enterovirus B coat proteins {Human echovirus 11 [TaxId: 12078]}
gaqvstqktgahetglrasgnsiihytninyykdaasnsanrqdftqdpgkftepvkdim
vkslpalnXsdrvrsitlgnstittqesanvvvgygrwpeylrddeataedqptqpdvat
crfytlesvtwekdspgwwwkfpdalkdmglfgqnmyyhylgragytihvqcnaskfhqg
cllvvcvpeaemgcstvdgtvnehglsegetakkfsatgtngtntvqsivtnagmgvgvg
nltifphqwinlrtnncativmpyinnvpmdnmfrhhnftlmiipfvplnyssdfstyvp
itvtvapmcaeynglrlstalq

Sequence, based on observed residues (ATOM records):

>g1h8t.1 b.121.4.1 (D:,B:) Human enterovirus B coat proteins {Human echovirus 11 [TaxId: 12078]}
gaqvstqktgahetsiihytninyykdaasnsanrqdftqdpgkftepvkdimvkslpal
nXsdrvrsitlgnstittqesanvvvgygrwpeylrddeataedqptqpdvatcrfytle
svtwekdspgwwwkfpdalkdmglfgqnmyyhylgragytihvqcnaskfhqgcllvvcv
peaemgcstvdgtvnehglsegetakkfsatgtngtntvqsivtnagmgvgvgnltifph
qwinlrtnncativmpyinnvpmdnmfrhhnftlmiipfvplnyssdfstyvpitvtvap
mcaeynglrlstalq

Timeline for d1h8t.1:

• d1h8t.1 first appeared in SCOP 1.65
  
• d1h8t.1 appears in SCOPe 2.02
  
• d1h8t.1 appears in SCOPe 2.04
  
• d1h8t.1 appears in the current release, SCOPe 2.08