SCOPe 2.04: Domain d1nmda1: 1nmd A:4-146

Lineage for d1nmda1 (1nmd A:4-146)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.1: Actin-like ATPase domain [53067] (16 families)
   duplication contains two domains of this fold

5. Family c.55.1.1: Actin/HSP70 [53068] (8 proteins)

6. Protein Actin [53073] (7 species)

7. Species Slime mold (Dictyostelium discoideum) [TaxId:44689] [53076] (6 PDB entries)

8. Domain d1nmda1: 1nmd A:4-146 [80656]
   Other proteins in same PDB: d1nmdg_
   complexed with atp, ca, so2, so4

Details for d1nmda1

PDB Entry: 1nmd, 1.9 Å

PDB Description: Crystal Structure of D. Discoideum Actin-Gelsolin Segment 1 Complex Crystallized In Presence Of Lithium ATP

PDB Compounds: (A:) actin

SCOPe Domain Sequences for d1nmda1:

Sequence, based on SEQRES records:

>d1nmda1 c.55.1.1 (A:4-146) Actin {Slime mold (Dictyostelium discoideum) [TaxId: 44689]}
dvqalvidngsgmckagfagddapravfpsivgrprhtgvmvgmgqkdsyvgdeaqskrg
iltlkypiehgivtnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmtqim
fetfntpamyvaiqavlslyasg

Sequence, based on observed residues (ATOM records):

>d1nmda1 c.55.1.1 (A:4-146) Actin {Slime mold (Dictyostelium discoideum) [TaxId: 44689]}
dvqalvidngsgmckagfagddapravfpsivgrprhdsyvgdeaqskrgiltlkypieh
givtnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmtqimfetfntpamy
vaiqavlslyasg

Timeline for d1nmda1:

• d1nmda1 first appeared in SCOP 1.63
  
• d1nmda1 appears in SCOPe 2.03
  
• d1nmda1 appears in SCOPe 2.05
  
• d1nmda1 appears in the current release, SCOPe 2.08