SCOPe 2.07: Domain d1lrna_: 1lrn A:

Lineage for d1lrna_ (1lrn A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)

6. Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) [51602] (5 species)

7. Species Aquifex aeolicus [TaxId:63363] [63922] (32 PDB entries)

8. Domain d1lrna_: 1lrn A: [78159]
   complexed with cd, po4; mutant

Details for d1lrna_

PDB Entry: 1lrn, 2.1 Å

PDB Description: aquifex aeolicus kdo8p synthase h185g mutant in complex with cadmium

PDB Compounds: (A:) KDO-8-phosphate synthetase

SCOPe Domain Sequences for d1lrna_:

Sequence, based on SEQRES records:

>d1lrna_ c.1.10.4 (A:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Aquifex aeolicus [TaxId: 63363]}
ekflviagpcaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgle
ygvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgrav
nvkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakviy
datgsvqlpgglgdksggmrefifpliraavavgcdgvfmethpepekalsdastqlpls
qlegiieaileirevaskyyeti

Sequence, based on observed residues (ATOM records):

>d1lrna_ c.1.10.4 (A:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Aquifex aeolicus [TaxId: 63363]}
ekflviagpcaieseelllkvgeeikrlsekfkevefvfkssfdkanrssihsfrghgle
ygvkalrkvkeefglkittdiheswqaepvaevadiiqipaflcrqtdlllaaaktgrav
nvkkgqflapwdtknvveklkfggakeiyltergttfgynnlvvdfrslpimkqwakviy
datgsvqlpgglggmrefifpliraavavgcdgvfmethpepekalsdastqlplsqleg
iieaileirevaskyyeti

Timeline for d1lrna_:

• d1lrna_ first appeared in SCOP 1.63
  
• d1lrna_ appears in SCOPe 2.06
  
• d1lrna_ appears in the current release, SCOPe 2.08