SCOP 1.71: Species: Archaeon Pyrococcus horikoshii

Lineage for Species: Archaeon Pyrococcus horikoshii

Root: SCOP 1.71
Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (32 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)
Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)
Protein Archaeosine tRNA-guanine transglycosylase, N-terminal domain [75096] (1 species)
Species Archaeon Pyrococcus horikoshii [TaxId:53953] [75097] (4 PDB entries)

PDB entries in Species: Archaeon Pyrococcus horikoshii:

Domain(s) for 1iq8:
1. Domain d1iq8a1: 1iq8 A:6-360 [71270]
  Other proteins in same PDB: d1iq8a3, d1iq8a4, d1iq8b3, d1iq8b4
2. Domain d1iq8b1: 1iq8 B:6-360 [71272]
  Other proteins in same PDB: d1iq8a3, d1iq8a4, d1iq8b3, d1iq8b4
  complexed with mg, zn
Domain(s) for 1it7:
1. Domain d1it7a1: 1it7 A:6-360 [71409]
  Other proteins in same PDB: d1it7a3, d1it7a4, d1it7b3, d1it7b4
2. Domain d1it7b1: 1it7 B:6-360 [71411]
  Other proteins in same PDB: d1it7a3, d1it7a4, d1it7b3, d1it7b4
  complexed with gun, mg, zn
Domain(s) for 1it8:
1. Domain d1it8a1: 1it8 A:6-360 [71413]
  Other proteins in same PDB: d1it8a3, d1it8a4, d1it8b3, d1it8b4
2. Domain d1it8b1: 1it8 B:6-360 [71415]
  Other proteins in same PDB: d1it8a3, d1it8a4, d1it8b3, d1it8b4
  complexed with mg, pq0, zn
Domain(s) for 1j2b:
1. Domain d1j2ba2: 1j2b A:7-360 [84011]
  Other proteins in same PDB: d1j2ba1, d1j2ba3, d1j2bb1, d1j2bb3
2. Domain d1j2bb2: 1j2b B:7-360 [84014]
  Other proteins in same PDB: d1j2ba1, d1j2ba3, d1j2bb1, d1j2bb3
  complexed with mg, zn

More info for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from c.1.20.1 Archaeosine tRNA-guanine transglycosylase, N-terminal domain

Timeline for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from c.1.20.1 Archaeosine tRNA-guanine transglycosylase, N-terminal domain:

Species Archaeon Pyrococcus horikoshii [TaxId:53953] from c.1.20.1 Archaeosine tRNA-guanine transglycosylase, N-terminal domain first appeared in SCOP 1.61
Species Archaeon Pyrococcus horikoshii [TaxId:53953] from c.1.20.1 Archaeosine tRNA-guanine transglycosylase, N-terminal domain appears in SCOP 1.69
Species Archaeon Pyrococcus horikoshii [TaxId:53953] from c.1.20.1 Archaeosine tRNA-guanine transglycosylase, N-terminal domain appears in SCOP 1.73
Species Archaeon Pyrococcus horikoshii [TaxId:53953] from c.1.20.1 Archaeosine tRNA-guanine transglycosylase, N-terminal domain appears in the current release, SCOPe 2.08, called Species Pyrococcus horikoshii [TaxId:53953] from c.1.20.1 Archaeosine tRNA-guanine transglycosylase, N-terminal domain