Lineage for Species: Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089551Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family) (S)
  5. 2089552Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 protein domains)
  6. 2089553Protein Archaeosine tRNA-guanine transglycosylase, N-terminal domain [75096] (1 species)
  7. 2089554Species Pyrococcus horikoshii [TaxId:53953] [75097] (4 PDB entries)

PDB entries in Species: Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 1iq8:
    1. 2089555Domain d1iq8a1: 1iq8 A:6-360 [71270]
      Other proteins in same PDB: d1iq8a3, d1iq8a4, d1iq8b3, d1iq8b4
      complexed with mg, zn
    2. 2089556Domain d1iq8b1: 1iq8 B:6-360 [71272]
      Other proteins in same PDB: d1iq8a3, d1iq8a4, d1iq8b3, d1iq8b4
      complexed with mg, zn
  2. Domain(s) for 1it7:
    1. 2089557Domain d1it7a1: 1it7 A:6-360 [71409]
      Other proteins in same PDB: d1it7a3, d1it7a4, d1it7b3, d1it7b4
      protein/RNA complex; complexed with gun, mg, zn
    2. 2089558Domain d1it7b1: 1it7 B:6-360 [71411]
      Other proteins in same PDB: d1it7a3, d1it7a4, d1it7b3, d1it7b4
      protein/RNA complex; complexed with gun, mg, zn
  3. Domain(s) for 1it8:
    1. 2089559Domain d1it8a1: 1it8 A:6-360 [71413]
      Other proteins in same PDB: d1it8a3, d1it8a4, d1it8b3, d1it8b4
      protein/RNA complex; complexed with mg, pq0, zn
    2. 2089560Domain d1it8b1: 1it8 B:6-360 [71415]
      Other proteins in same PDB: d1it8a3, d1it8a4, d1it8b3, d1it8b4
      protein/RNA complex; complexed with mg, pq0, zn
  4. Domain(s) for 1j2b:
    1. 2089561Domain d1j2ba2: 1j2b A:7-360 [84011]
      Other proteins in same PDB: d1j2ba1, d1j2ba3, d1j2bb1, d1j2bb3
      protein/RNA complex; complexed with mg, zn
    2. 2089562Domain d1j2bb2: 1j2b B:7-360 [84014]
      Other proteins in same PDB: d1j2ba1, d1j2ba3, d1j2bb1, d1j2bb3
      protein/RNA complex; complexed with mg, zn

More info for Species Pyrococcus horikoshii [TaxId:53953] from c.1.20.1 Archaeosine tRNA-guanine transglycosylase, N-terminal domain

Timeline for Species Pyrococcus horikoshii [TaxId:53953] from c.1.20.1 Archaeosine tRNA-guanine transglycosylase, N-terminal domain: