SCOPe 2.06: Family b.34.10.1: Cap-Gly domain

Lineage for Family b.34.10.1: Cap-Gly domain

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.10: Cap-Gly domain [74924] (2 families)

5. Family b.34.10.1: Cap-Gly domain [74925] (11 proteins)
   Pfam PF01302

Proteins:

1. Centrosome-associated protein 350 [141232] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [141233] (1 PDB entry)
     Uniprot Q5VT06 2473-2581

2. CLIP-115 [141230] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [141231] (5 PDB entries)
     Uniprot Q9UDT6 219-289! Uniprot Q9UDT6 68-149

3. CLIP170-related 59kda protein CLIPR-59 (1500005P14Rik) [117162] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [141229] (1 PDB entry)
      Uniprot Q96DZ5 285-366

   2. Species Mouse (Mus musculus) [TaxId:10090] [117163] (1 PDB entry)
      Uniprot Q9DB67 19-107

4. Cylindromatosis tumour-suppressor Cyld [82065] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [82066] (3 PDB entries)
     Uniprot Q9NQC7 125-206, 228-304, 460-550

5. Cytoskeleton-associated protein F53F4.3 [74926] (1 species)

   • Species Nematode (Caenorhabditis elegans) [TaxId:6239] [74927] (2 PDB entries)
     Uniprot Q20728 132-229

6. Dynactin 1 [141234] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [141235] (9 PDB entries)
     Uniprot Q14203 1-99! Uniprot Q14203 25-98

7. Kinesin-like protein kif13b [141239] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [141240] (1 PDB entry)
     Uniprot Q9NQT8 1684-1771

8. Restin [141236] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [141237] (2 PDB entries)
      Uniprot P30622 1-128! Uniprot P30622 181-340

   2. Species Mouse (Mus musculus) [TaxId:10090] [141238] (1 PDB entry)
      Uniprot Q922J3 58-128

9. Restin-like protein 2, Rsnl2 [117164] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [117165] (2 PDB entries)
     Uniprot Q8CI96 266-354; 617-696

10. Tubulin-specific chaperone B (SKAP1) [117160] (1 species)

    • Species Mouse (Mus musculus) [TaxId:10090] [117161] (1 PDB entry)
      Uniprot Q9D1E6 134-233

11. automated matches [226906] (1 species)
    not a true protein

    • Species Human (Homo sapiens) [TaxId:9606] [225131] (1 PDB entry)

More info for Family b.34.10.1: Cap-Gly domain

Timeline for Family b.34.10.1: Cap-Gly domain:

• Family b.34.10.1: Cap-Gly domain first appeared in SCOP 1.61
  
• Family b.34.10.1: Cap-Gly domain appears in SCOPe 2.05
  
• Family b.34.10.1: Cap-Gly domain appears in SCOPe 2.07
  
• Family b.34.10.1: Cap-Gly domain appears in the current release, SCOPe 2.08