SCOPe 2.08: Domain d1fmxb_: 1fmx B:

Lineage for d1fmxb_ (1fmx B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.50: Acid proteases [50629] (1 superfamily)
   barrel, closed; n=6, S=10, complex topology

4. Superfamily b.50.1: Acid proteases [50630] (4 families)

5. Family b.50.1.2: Pepsin-like [50646] (11 proteins)
   duplication: consists of two similar barrel domains
   N-terminal: barrel, partly opened; n*=6, S*=10

6. Protein Acid protease [50649] (9 species)

7. Species Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId:4932] [50654] (12 PDB entries)
   synonym: saccharopepsin

8. Domain d1fmxb_: 1fmx B: [70142]
   complexed with nag

Details for d1fmxb_

PDB Entry: 1fmx, 2.61 Å

PDB Description: structure of native proteinase a in the space group p21

PDB Compounds: (B:) saccharopepsin

SCOPe Domain Sequences for d1fmxb_:

Sequence, based on SEQRES records:

>d1fmxb_ b.50.1.2 (B:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]}
gghdvpltnylnaqyytditlgtppqnfkvildtgssnlwvpsnecgslacflhskydhe
asssykangtefaiqygtgslegyisqdtlsigdltipkqdfaeatsepgltfafgkfdg
ilglgydtisvdkvvppfynaiqqdlldekrfafylgdtskdtenggeatfggideskfk
gditwlpvrrkaywevkfegiglgdeyaeleshgaaidtgtslitlpsglaeminaeiga
kkgwtgqytldcntrdnlpdlifnfngynftigpydytlevsgscisaitpmdfpepvgp
laivgdaflrkyysiydlgnnavglakai

Sequence, based on observed residues (ATOM records):

>d1fmxb_ b.50.1.2 (B:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]}
gghdvpltnylnaqyytditlgtppqnfkvildtgssnlwvpsnecgslacflhskydhe
asssykangtefaiqylegyisqdtlsigdltipkqdfaeatsepgltfafgkfdgilgl
gydtisvdkvvppfynaiqqdlldekrfafylgdtskdtenggeatfggideskfkgdit
wlpvrrkaywevkfegiglgdeyaeleshgaaidtgtslitlpsglaeminaeigakkgw
tgqytldcntrdnlpdlifnfngynftigpydytlevsgscisaitpmdfpepvgplaiv
gdaflrkyysiydlgnnavglakai

Timeline for d1fmxb_:

• d1fmxb_ first appeared in SCOP 1.61
  
• d1fmxb_ appears in SCOPe 2.07