SCOP 1.65: Species: Deinococcus radiodurans

Lineage for Species: Deinococcus radiodurans

Root: SCOP 1.65
Class i: Low resolution protein structures [58117] (18 folds)
Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)
Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families)
Family i.1.1.2: Large subunit [58124] (3 proteins)
Protein 50S subunit [58125] (3 species)
Species Deinococcus radiodurans [TaxId:1299] [69993] (13 PDB entries)

PDB entries in Species: Deinococcus radiodurans:

Domain(s) for 1j5a:
1. Domain d1j5aa_: 1j5a A: [71536]
2. Domain d1j5ak_: 1j5a K: [71537]
3. Domain d1j5al_: 1j5a L: [71538]
4. Domain d1j5am_: 1j5a M: [71539]
Domain(s) for 1jzx:
1. Domain d1jzxa_: 1jzx A: [67884]
2. Domain d1jzxk_: 1jzx K: [67885]
3. Domain d1jzxl_: 1jzx L: [67886]
4. Domain d1jzxm_: 1jzx M: [67887]
Domain(s) for 1jzy:
1. Domain d1jzya_: 1jzy A: [67888]
2. Domain d1jzyk_: 1jzy K: [67889]
3. Domain d1jzyl_: 1jzy L: [67890]
4. Domain d1jzym_: 1jzy M: [67891]
Domain(s) for 1jzz:
1. Domain d1jzza_: 1jzz A: [67892]
2. Domain d1jzzk_: 1jzz K: [67893]
3. Domain d1jzzl_: 1jzz L: [67894]
4. Domain d1jzzm_: 1jzz M: [67895]
Domain(s) for 1k01:
1. Domain d1k01a_: 1k01 A: [67900]
2. Domain d1k01k_: 1k01 K: [67901]
3. Domain d1k01l_: 1k01 L: [67902]
4. Domain d1k01m_: 1k01 M: [67903]
Domain(s) for 1njm:
1. Domain d1njm0_: 1njm 0: [80547]
2. Domain d1njmk_: 1njm K: [80548]
3. Domain d1njmt_: 1njm T: [80549]
  complexed with a tRNA acceptor stem mimic (asm) and the antibiotic sparsomycin
Domain(s) for 1njn:
- Domain d1njn0_: 1njn 0: [80550]
  complexed with the antibiotic sparsomycin
Domain(s) for 1njo:
- Domain d1njo0_: 1njo 0: [80551]
  complexed with a short substrate analog accpuromycin (accp)
Domain(s) for 1njp:
1. Domain d1njp0_: 1njp 0: [80552]
2. Domain d1njpk_: 1njp K: [80553]
3. Domain d1njpt_: 1njp T: [80554]
  complexed with a tRNA acceptor stem mimic (asm)
Domain(s) for 1nkw:
1. Domain d1nkw0_: 1nkw 0: [80580]
2. Domain d1nkw1_: 1nkw 1: [80581]
3. Domain d1nkw2_: 1nkw 2: [80582]
4. Domain d1nkw3_: 1nkw 3: [80583]
5. Domain d1nkw4_: 1nkw 4: [80584]
  CA-atoms only for the ribosomal protein structures
6. Domain d1nkw9_: 1nkw 9: [80585]
7. Domain d1nkwa_: 1nkw A: [80586]
8. Domain d1nkwb_: 1nkw B: [80587]
9. Domain d1nkwc_: 1nkw C: [80588]
10. Domain d1nkwd_: 1nkw D: [80589]
11. Domain d1nkwe_: 1nkw E: [80590]
12. Domain d1nkwf_: 1nkw F: [80591]
13. Domain d1nkwg_: 1nkw G: [80592]
14. Domain d1nkwh_: 1nkw H: [80593]
15. Domain d1nkwi_: 1nkw I: [80594]
16. Domain d1nkwj_: 1nkw J: [80595]
17. Domain d1nkwk_: 1nkw K: [80596]
18. Domain d1nkwl_: 1nkw L: [80597]
19. Domain d1nkwm_: 1nkw M: [80598]
20. Domain d1nkwn_: 1nkw N: [80599]
21. Domain d1nkwo_: 1nkw O: [80600]
22. Domain d1nkwp_: 1nkw P: [80601]
23. Domain d1nkwq_: 1nkw Q: [80602]
24. Domain d1nkwr_: 1nkw R: [80603]
25. Domain d1nkws_: 1nkw S: [80604]
26. Domain d1nkwt_: 1nkw T: [80605]
27. Domain d1nkwu_: 1nkw U: [80606]
28. Domain d1nkww_: 1nkw W: [80607]
29. Domain d1nkwx_: 1nkw X: [80608]
30. Domain d1nkwy_: 1nkw Y: [80609]
31. Domain d1nkwz_: 1nkw Z: [80610]
Domain(s) for 1nwx:
1. Domain d1nwx0_: 1nwx 0: [86308]
2. Domain d1nwx1_: 1nwx 1: [86309]
3. Domain d1nwx2_: 1nwx 2: [86310]
4. Domain d1nwx3_: 1nwx 3: [86311]
5. Domain d1nwx4_: 1nwx 4: [86312]
  CA-atoms only for the ribosomal protein structures
6. Domain d1nwx9_: 1nwx 9: [86313]
7. Domain d1nwxa_: 1nwx A: [86314]
8. Domain d1nwxb_: 1nwx B: [86315]
9. Domain d1nwxc_: 1nwx C: [86316]
10. Domain d1nwxd_: 1nwx D: [86317]
11. Domain d1nwxe_: 1nwx E: [86318]
12. Domain d1nwxf_: 1nwx F: [86319]
13. Domain d1nwxg_: 1nwx G: [86320]
14. Domain d1nwxh_: 1nwx H: [86321]
15. Domain d1nwxi_: 1nwx I: [86322]
16. Domain d1nwxj_: 1nwx J: [86323]
17. Domain d1nwxk_: 1nwx K: [86324]
18. Domain d1nwxl_: 1nwx L: [86325]
19. Domain d1nwxm_: 1nwx M: [86326]
20. Domain d1nwxn_: 1nwx N: [86327]
21. Domain d1nwxo_: 1nwx O: [86328]
22. Domain d1nwxp_: 1nwx P: [86329]
23. Domain d1nwxq_: 1nwx Q: [86330]
24. Domain d1nwxr_: 1nwx R: [86331]
25. Domain d1nwxs_: 1nwx S: [86332]
26. Domain d1nwxt_: 1nwx T: [86333]
27. Domain d1nwxu_: 1nwx U: [86334]
28. Domain d1nwxw_: 1nwx W: [86335]
29. Domain d1nwxx_: 1nwx X: [86336]
30. Domain d1nwxy_: 1nwx Y: [86337]
31. Domain d1nwxz_: 1nwx Z: [86338]
Domain(s) for 1nwy:
1. Domain d1nwy0_: 1nwy 0: [86339]
2. Domain d1nwy1_: 1nwy 1: [86340]
3. Domain d1nwy2_: 1nwy 2: [86341]
4. Domain d1nwy3_: 1nwy 3: [86342]
5. Domain d1nwy4_: 1nwy 4: [86343]
  CA-atoms only for the ribosomal protein structures
6. Domain d1nwy9_: 1nwy 9: [86344]
7. Domain d1nwya_: 1nwy A: [86345]
8. Domain d1nwyb_: 1nwy B: [86346]
9. Domain d1nwyc_: 1nwy C: [86347]
10. Domain d1nwyd_: 1nwy D: [86348]
11. Domain d1nwye_: 1nwy E: [86349]
12. Domain d1nwyf_: 1nwy F: [86350]
13. Domain d1nwyg_: 1nwy G: [86351]
14. Domain d1nwyh_: 1nwy H: [86352]
15. Domain d1nwyi_: 1nwy I: [86353]
16. Domain d1nwyj_: 1nwy J: [86354]
17. Domain d1nwyk_: 1nwy K: [86355]
18. Domain d1nwyl_: 1nwy L: [86356]
19. Domain d1nwym_: 1nwy M: [86357]
20. Domain d1nwyn_: 1nwy N: [86358]
21. Domain d1nwyo_: 1nwy O: [86359]
22. Domain d1nwyp_: 1nwy P: [86360]
23. Domain d1nwyq_: 1nwy Q: [86361]
24. Domain d1nwyr_: 1nwy R: [86362]
25. Domain d1nwys_: 1nwy S: [86363]
26. Domain d1nwyt_: 1nwy T: [86364]
27. Domain d1nwyu_: 1nwy U: [86365]
28. Domain d1nwyw_: 1nwy W: [86366]
29. Domain d1nwyx_: 1nwy X: [86367]
30. Domain d1nwyy_: 1nwy Y: [86368]
31. Domain d1nwyz_: 1nwy Z: [86369]
Domain(s) for 1ond:
1. Domain d1ond0_: 1ond 0: [87138]
2. Domain d1ondq_: 1ond Q: [87139]
3. Domain d1ondz_: 1ond Z: [87140]
  complexed with troleandomycin macrolide antibiotic

More info for Species Deinococcus radiodurans [TaxId:1299] from i.1.1.2 50S subunit

Timeline for Species Deinococcus radiodurans [TaxId:1299] from i.1.1.2 50S subunit:

Species Deinococcus radiodurans [TaxId:1299] from i.1.1.2 50S subunit first appeared in SCOP 1.59
Species Deinococcus radiodurans [TaxId:1299] from i.1.1.2 50S subunit appears in SCOP 1.63
Species Deinococcus radiodurans [TaxId:1299] from i.1.1.2 50S subunit appears in SCOP 1.67
Species Deinococcus radiodurans [TaxId:1299] from i.1.1.2 50S subunit appears in the current release, SCOPe 2.08, called Species Deinococcus radiodurans [TaxId:1299] from i.1.1.2 Prokaryotic (50S subunit)