SCOPe 2.02: Domain d1jrpd2: 1jrp D:124-777

Lineage for d1jrpd2 (1jrp D:124-777)

1. Root: SCOPe 2.02

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.133: Molybdenum cofactor-binding domain [56002] (1 superfamily)
   beta(2)-alpha-beta-alpha-beta; 2 layers: a/b; mixed sheet: order 1243: crossing loops

4. Superfamily d.133.1: Molybdenum cofactor-binding domain [56003] (1 family)
   duplication: consists of 4 structural repeats arranged in 2 lobes
   contains one left-hand beta-alpha-beta unit per lobe

5. Family d.133.1.1: Molybdenum cofactor-binding domain [56004] (6 proteins)

6. Protein Xanthine dehydrogenase chain B, C-terminal domain [69813] (1 species)

7. Species Rhodobacter capsulatus [TaxId:1061] [69814] (2 PDB entries)

8. Domain d1jrpd2: 1jrp D:124-777 [67172]
   Other proteins in same PDB: d1jrpa1, d1jrpa2, d1jrpa3, d1jrpa4, d1jrpb1, d1jrpc1, d1jrpc2, d1jrpc3, d1jrpc4, d1jrpd1, d1jrpe1, d1jrpe2, d1jrpe3, d1jrpe4, d1jrpf1, d1jrpg1, d1jrpg2, d1jrpg3, d1jrpg4, d1jrph1
   complexed with 141, ca, fad, fes, mos, mpn

Details for d1jrpd2

PDB Entry: 1jrp, 3 Å

PDB Description: crystal structure of xanthine dehydrogenase inhibited by alloxanthine from rhodobacter capsulatus

PDB Compounds: (D:) xanthine dehydrogenase, chain B

SCOPe Domain Sequences for d1jrpd2:

Sequence, based on SEQRES records:

>d1jrpd2 d.133.1.1 (D:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]}
pailtldqalaadsrfeggpviwargdvetalagaahlaegcfeiggqehfylegqaala
lpaeggvvihcssqhpseiqhkvahalglafhdvrvemrrmgggfggkesqgnhlaiaca
vaaratgrpckmrydrdddmvitgkrhdfriryrigadasgkllgadfvhlarcgwsadl
slpvcdramlhadgsyfvpalrieshrlrtntqsntafrgfggpqgalgmeraiehlarg
mgrdpaelralnfydppergglsappsppepiatkktqtthygqevadcvlgelvtrlqk
sanfttrraeiaawnstnrtlargialspvkfgisftlthlnqagalvqiytdgsvalnh
ggtemgqglhakmvqvaaavlgidpvqvritatdtskvpntsataassgadmngmavkda
cetlrgrlagfvaaregcaardvifdagqvqasgkswrfaeivaaaymarislsatgfya
tpklswdrlrgqgrpflyfaygaaitevvidrltgenrilrtdilhdagaslnpaldigq
iegayvqgagwltteelvwdhcgrlmthapstykipafsdrprifnvalwdqpnreetif
rskavgeppfllgisaflalhdacaacgphwpdlqapatpeavlaavrraegra

Sequence, based on observed residues (ATOM records):

>d1jrpd2 d.133.1.1 (D:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]}
pailtldqalaadsrfeggpviwargdvetalagaahlaegcfeiggqehfylegqaala
lpaeggvvihcssqhpseiqhkvahalglafhdvrvemrrmgggfggkesqgnhlaiaca
vaaratgrpckmrydrdddmvitgkrhdfriryrigadasgkllgadfvhlarcgwsadl
slpvcdramlhadgsyfvpalrieshrlrtntqsntafrgfggpqgalgmeraiehlarg
mgrdpaelralnfydppekktqtthygqevadcvlgelvtrlqksanfttrraeiaawns
tnrtlargialspvkfgisftlthlnqagalvqiytdgsvalnhggtemgqglhakmvqv
aaavlgidpvqvritatdtskvpntsataassgadmngmavkdacetlrgrlagfvaare
gcaardvifdagqvqasgkswrfaeivaaaymarislsatgfyatpklswdrlrgqgrpf
lyfaygaaitevvidrltgenrilrtdilhdagaslnpaldigqiegayvqgagwlttee
lvwdhcgrlmthapstykipafsdrprifnvalwdqpnreetifrskavgeppfllgisa
flalhdacaacgphwpdlqapatpeavlaavrraegra

Timeline for d1jrpd2:

• d1jrpd2 first appeared in SCOP 1.59
  
• d1jrpd2 appears in SCOPe 2.01
  
• d1jrpd2 appears in SCOPe 2.03
  
• d1jrpd2 appears in the current release, SCOPe 2.08