Lineage for d1ibmd_ (1ibm D:)

  1. Root: SCOPe 2.07
  2. 2647132Class i: Low resolution protein structures [58117] (25 folds)
  3. 2647133Fold i.1: Ribosome and ribosomal fragments [58118] (1 superfamily)
  4. 2647134Superfamily i.1.1: Ribosome and ribosomal fragments [58119] (3 families) (S)
  5. 2647135Family i.1.1.1: Ribosome complexes [58120] (3 proteins)
  6. 2647136Protein 70S ribosome functional complex [58121] (4 species)
  7. 2647693Species Thermus thermophilus [TaxId:274] [58122] (20 PDB entries)
  8. 2647748Domain d1ibmd_: 1ibm D: [62209]
    protein/RNA complex; complexed with mg, zn

Details for d1ibmd_

PDB Entry: 1ibm (more details), 3.31 Å

PDB Description: structure of the thermus thermophilus 30s ribosomal subunit in complex with a messenger rna fragment and cognate transfer rna anticodon stem-loop bound at the a site
PDB Compounds: (D:) 30S ribosomal protein S4

SCOPe Domain Sequences for d1ibmd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ibmd_ i.1.1.1 (D:) 70S ribosome functional complex {Thermus thermophilus [TaxId: 274]}
gryigpvcrlcrregvklylkgercyspkcamerrpyppgqhgqkrarrpsdyavrlrek
qklrriygiserqfrnlfeeaskkkgvtgsvflgllesrldnvvyrlgfavsrrqarqlv
rhghitvngrrvdlpsyrvrpgdeiavaeksrnlelirqnleamkgrkvgpwlsldvegm
kgkflrlpdredlalpvneqlviefysr

SCOPe Domain Coordinates for d1ibmd_:

Click to download the PDB-style file with coordinates for d1ibmd_.
(The format of our PDB-style files is described here.)

Timeline for d1ibmd_: