SCOP 1.75: Protein: Beta chain

Lineage for Protein: Beta chain

Root: SCOP 1.75
Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

Superfamily d.58.31: Methyl-coenzyme M reductase subunits [55088] (2 families)

(S)

each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures

Family d.58.31.2: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain [55094] (2 proteins)
C-terminal domain is all-alpha
Protein Beta chain [55099] (3 species)

Species:

Archaeon Methanobacterium thermoautotrophicum [TaxId:145262] [55100] (5 PDB entries)
1. Domains for 1hbm:
  1. Domain d1hbmb2: 1hbm B:2-188 [60891]
    Other proteins in same PDB: d1hbma1, d1hbma2, d1hbmb1, d1hbmc_, d1hbmd1, d1hbmd2, d1hbme1, d1hbmf_
  2. Domain d1hbme2: 1hbm E:2-188 [60896]
    Other proteins in same PDB: d1hbma1, d1hbma2, d1hbmb1, d1hbmc_, d1hbmd1, d1hbmd2, d1hbme1, d1hbmf_
    complexed with cl, f43, gol, mg, mgn, na, sht, zn
2. Domains for 1hbn:
  1. Domain d1hbnb2: 1hbn B:2-188 [60901]
    Other proteins in same PDB: d1hbna1, d1hbna2, d1hbnb1, d1hbnc_, d1hbnd1, d1hbnd2, d1hbne1, d1hbnf_
  2. Domain d1hbne2: 1hbn E:2-188 [60906]
    Other proteins in same PDB: d1hbna1, d1hbna2, d1hbnb1, d1hbnc_, d1hbnd1, d1hbnd2, d1hbne1, d1hbnf_
    complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
3. Domains for 1hbo:
  1. Domain d1hbob2: 1hbo B:2-188 [60911]
    Other proteins in same PDB: d1hboa1, d1hboa2, d1hbob1, d1hboc_, d1hbod1, d1hbod2, d1hboe1, d1hbof_
  2. Domain d1hboe2: 1hbo E:2-188 [60916]
    Other proteins in same PDB: d1hboa1, d1hboa2, d1hbob1, d1hboc_, d1hbod1, d1hbod2, d1hboe1, d1hbof_
    complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
4. Domains for 1hbu:
  1. Domain d1hbub2: 1hbu B:2-188 [60921]
    Other proteins in same PDB: d1hbua1, d1hbua2, d1hbub1, d1hbuc_, d1hbud1, d1hbud2, d1hbue1, d1hbuf_
  2. Domain d1hbue2: 1hbu E:2-188 [60926]
    Other proteins in same PDB: d1hbua1, d1hbua2, d1hbub1, d1hbuc_, d1hbud1, d1hbud2, d1hbue1, d1hbuf_
    complexed with cl, com, f43, gol, mg, mgn, na, tp7, zn
5. Domains for 1mro:
  1. Domain d1mrob2: 1mro B:2-188 [39449]
    Other proteins in same PDB: d1mroa1, d1mroa2, d1mrob1, d1mroc_, d1mrod1, d1mrod2, d1mroe1, d1mrof_
  2. Domain d1mroe2: 1mro E:2-188 [39450]
    Other proteins in same PDB: d1mroa1, d1mroa2, d1mrob1, d1mroc_, d1mrod1, d1mrod2, d1mroe1, d1mrof_
    complexed with com, f43, gol, mgn, na, tp7, zn
Archaeon Methanopyrus kandleri [TaxId:2320] [55101] (1 PDB entry)
- Domains for 1e6v:
  1. Domain d1e6vb2: 1e6v B:7-189 [39451]
    Other proteins in same PDB: d1e6va1, d1e6va2, d1e6vb1, d1e6vc_, d1e6vd1, d1e6vd2, d1e6ve1, d1e6vf_
  2. Domain d1e6ve2: 1e6v E:7-189 [39452]
    Other proteins in same PDB: d1e6va1, d1e6va2, d1e6vb1, d1e6vc_, d1e6vd1, d1e6vd2, d1e6ve1, d1e6vf_
    complexed with com, f43, tp7
Archaeon Methanosarcina barkeri [TaxId:2208] [55102] (1 PDB entry)
- Domains for 1e6y:
  1. Domain d1e6yb2: 1e6y B:2002-2185 [39453]
    Other proteins in same PDB: d1e6ya1, d1e6ya2, d1e6yb1, d1e6yc_, d1e6yd1, d1e6yd2, d1e6ye1, d1e6yf_
  2. Domain d1e6ye2: 1e6y E:5002-5185 [39454]
    Other proteins in same PDB: d1e6ya1, d1e6ya2, d1e6yb1, d1e6yc_, d1e6yd1, d1e6yd2, d1e6ye1, d1e6yf_
    complexed with com, f43, gol, tp7

More info for Protein Beta chain from d.58.31.2: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain

Timeline for Protein Beta chain from d.58.31.2: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain:

Protein Beta chain from d.58.31.2: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain first appeared (with stable ids) in SCOP 1.55
Protein Beta chain from d.58.31.2: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain appears in SCOP 1.73
Protein Beta chain from d.58.31.2: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain appears in SCOPe 2.01
Protein Beta chain from d.58.31.2: Methyl-coenzyme M reductase alpha and beta chain N-terminal domain appears in the current release, SCOPe 2.08