Lineage for Superfamily d.17.4: NTF2-like

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2161468Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. 2161993Superfamily d.17.4: NTF2-like [54427] (31 families) (S)
    has a beta-alpha(2)-beta insertion after the main helix

Families:

  1. 2161994d.17.4.1: Scytalone dehydratase [54428] (1 protein)
    automatically mapped to Pfam PF02982
  2. 2162017d.17.4.2: NTF2-like [54431] (6 protein domains)
  3. 2162085d.17.4.3: Ketosteroid isomerase-like [54434] (3 protein domains)
    automatically mapped to Pfam PF12680
    automatically mapped to Pfam PF02136
  4. 2162266d.17.4.4: Ring hydroxylating beta subunit [54438] (7 protein domains)
    Pfam PF00866
  5. 2162394d.17.4.5: Penicillin binding protein 2a (PBP2A), N-terminal domain [82595] (1 protein)
    some sequence similarity to KSI
    automatically mapped to Pfam PF05223
  6. 2162411d.17.4.6: Orange carotenoid protein, C-terminal domain [82598] (1 protein)
    automatically mapped to Pfam PF02136
  7. 2162416d.17.4.7: Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A [89851] (2 protein domains)
    automatically mapped to Pfam PF13474
    automatically mapped to Pfam PF08332
  8. 2162458d.17.4.8: Limonene-1,2-epoxide hydrolase-like [89854] (3 protein domains)
    automatically mapped to Pfam PF07858
  9. 2162510d.17.4.9: SnoaL-like polyketide cyclase [102810] (6 protein domains)
  10. 2162539d.17.4.10: PhzA/PhzB-like [102813] (4 protein domains)
  11. 2162561d.17.4.11: Hypothetical protein egc068 from a soil-derived mobile gene cassette [110826] (1 protein)
    automatically mapped to Pfam PF07858
  12. 2162565d.17.4.12: PA1314-like [110829] (1 protein)
    COG4460
  13. 2162569d.17.4.13: TIM44-like [143001] (2 protein domains)
    contains extra N-terminal helices but lacks the beta-hairpin in the superfamily-specific insertion
    automatically mapped to Pfam PF04280
  14. 2162579d.17.4.14: Sbal0622-like [159985] (1 protein)
    PfamB PB002762
    automatically mapped to Pfam PF12893
  15. 2162594d.17.4.15: CHU142-like [159988] (1 protein)
    single domain covered by PfamB PB000743 in the N-terminal part and PfamB PB000860 in the C-terminal part
  16. 2162601d.17.4.16: SO0125-like [159991] (2 protein domains)
    PfamB PB003666
    automatically mapped to Pfam PF13474
  17. 2162613d.17.4.17: SAV4671-like [159996] (1 protein)
    PfamB PB000442; uncertain annotation of some members as 3-dehydroquinate dehydratase
  18. 2162619d.17.4.18: BxeB1374-like [159999] (2 protein domains)
    similar dimer to KSI
    automatically mapped to Pfam PF11533
  19. 2162630d.17.4.19: Atu0744-like [160004] (1 protein)
    PfamB PB003773
    automatically mapped to Pfam PF12680
  20. 2162635d.17.4.20: Rpa4348-like [160007] (2 protein domains)
    PfamB PB000085
  21. 2162642d.17.4.21: Ava4193-like [160012] (1 protein)
    PfamB PB183524
  22. 2162649d.17.4.22: YybH-like [160015] (1 protein)
    PfamB PB052627
    automatically mapped to Pfam PF13474
  23. 2162656d.17.4.23: PFL3262-like [160018] (1 protein)
    Pfam PF07080; DUF1348
  24. 2162663d.17.4.24: Exig0174-like [160021] (1 protein)
    PfamB PB092483
    automatically mapped to Pfam PF12680
  25. 2162668d.17.4.25: Rv3472-like [160024] (3 protein domains)
    similar trimer to Scytalone dehydratase
  26. 2162681d.17.4.26: VirB8-like [160029] (2 protein domains)
    Pfam PF04335
  27. 2162704d.17.4.27: ECA1476-like [160033] (1 protein)
    single domain covered by PfamB PB006272 in the N-terminal part and PfamB PB005262 in the C-terminal part
  28. 2162711d.17.4.28: BaiE/LinA-like [160036] (5 protein domains)
    PfamB PB000019; includes sequences of characterized enzymes BaiE and LinA
  29. 2162733d.17.4.29: Atu0742-like [160047] (1 protein)
    PfamB PB017405
    automatically mapped to Pfam PF12680
  30. 2162737d.17.4.30: SEC-C associated NTF2-like domain [160050] (1 protein)
    there is a C-terminal SEC-C motif, also there can be an additional SEC-C like motif at the N-terminus (there is only C-terminal motif in the new entry 2JQ5)
  31. 2162741d.17.4.0: automated matches [191337] (1 protein)
    not a true family

More info for Superfamily d.17.4: NTF2-like

Timeline for Superfamily d.17.4: NTF2-like: