SCOPe 2.08: Family c.86.1.1: Phosphoglycerate kinase

Lineage for Family c.86.1.1: Phosphoglycerate kinase

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.86: Phosphoglycerate kinase [53747] (1 superfamily)
   consists of two non-similar domains, 3 layers (a/b/a) each
   Domain 1 has parallel beta-sheet of 6 strands, order 342156
   Domain 2 has parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.86.1: Phosphoglycerate kinase [53748] (2 families)

5. Family c.86.1.1: Phosphoglycerate kinase [53749] (2 proteins)
   Domain 2 binds ATP
   automatically mapped to Pfam PF00162

Proteins:

1. Phosphoglycerate kinase [53750] (9 species)

   1. Species Bacillus stearothermophilus [TaxId:1422] [53752] (1 PDB entry)

   2. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [53751] (3 PDB entries)

   3. Species Escherichia coli [TaxId:562] [188193] (1 PDB entry)

   4. Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [89783] (3 PDB entries)

   5. Species Pig (Sus scrofa) [TaxId:9823] [64177] (4 PDB entries)

   6. Species Pseudomonas sp. [TaxId:76981] [370186] (1 PDB entry)

   7. Species Thermotoga maritima [TaxId:2336] [53753] (1 PDB entry)

   8. Species Thermus thermophilus [TaxId:274] [102677] (1 PDB entry)

   9. Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [53754] (2 PDB entries)

2. automated matches [190709] (5 species)
   not a true protein

   1. Species Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [189866] (2 PDB entries)

   2. Species Human (Homo sapiens) [TaxId:9606] [188478] (25 PDB entries)

   3. Species Mouse (Mus musculus) [TaxId:10090] [188280] (4 PDB entries)

   4. Species Plasmodium vivax [TaxId:5855] [381605] (3 PDB entries)

   5. Species Thermus caldophilus [TaxId:272] [187856] (1 PDB entry)

More info for Family c.86.1.1: Phosphoglycerate kinase

Timeline for Family c.86.1.1: Phosphoglycerate kinase:

• Family c.86.1.1: Phosphoglycerate kinase first appeared (with stable ids) in SCOP 1.55
  
• Family c.86.1.1: Phosphoglycerate kinase appears in SCOPe 2.07