Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2141948Fold c.86: Phosphoglycerate kinase [53747] (1 superfamily)
    consists of two non-similar domains, 3 layers (a/b/a) each
    Domain 1 has parallel beta-sheet of 6 strands, order 342156
    Domain 2 has parallel beta-sheet of 6 strands, order 321456
  4. 2141949Superfamily c.86.1: Phosphoglycerate kinase [53748] (2 families) (S)
  5. 2141950Family c.86.1.1: Phosphoglycerate kinase [53749] (2 protein domains)
    Domain 2 binds ATP
    automatically mapped to Pfam PF00162
  6. 2141985Protein automated matches [190709] (4 species)
    not a true protein

Species:

  1. 2141986Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [189866] (2 PDB entries)
    1. Domain for 3b2b:
    2. Domain for 3uwd:
  2. 2141989Human (Homo sapiens) [TaxId:9606] [188478] (22 PDB entries)
    1. Domain for 2wzb:
    2. Domain for 2wzc:
    3. Domain for 2wzd:
    4. Domain for 2x13:
    5. Domain for 2x14:
    6. Domain for 2x15:
    7. Domain for 2xe6:
    8. Domain for 2xe7:
    9. Domain for 2xe8:
    10. Domains for 2y3i:
      1. 2142012Domain d2y3ia_: 2y3i A: [170559]
        automated match to d1kf0a_
        complexed with 3pg, alf, cl, la8, mg
      2. 2142013Domain d2y3id_: 2y3i D: [170560]
        automated match to d1kf0a_
        complexed with 3pg, alf, cl, la8, mg
    11. Domain for 2ybe:
    12. Domain for 2zgv:
    13. Domains for 3c39:
      1. 2142000Domain d3c39a_: 3c39 A: [173006]
        automated match to d1kf0a_
        complexed with 3pg
      2. 2142001Domain d3c39b_: 3c39 B: [173007]
        automated match to d1kf0a_
        complexed with 3pg
    14. Domains for 3c3a:
      1. 2142006Domain d3c3aa_: 3c3a A: [173008]
        automated match to d1kf0a_
        complexed with 3pg, adp, mg
      2. 2142007Domain d3c3ab_: 3c3a B: [173009]
        automated match to d1kf0a_
        complexed with 3pg, adp, mg
    15. Domains for 3c3b:
      1. 2141995Domain d3c3ba_: 3c3b A: [173010]
        automated match to d1kf0a_
        complexed with cdp, po4
      2. 2141996Domain d3c3bb_: 3c3b B: [173011]
        automated match to d1kf0a_
        complexed with cdp, po4
    16. Domains for 3c3c:
      1. 2142010Domain d3c3ca_: 3c3c A: [173012]
        automated match to d1kf0a_
        complexed with 3pg, cdp, mg
      2. 2142011Domain d3c3cb_: 3c3c B: [173013]
        automated match to d1kf0a_
        complexed with 3pg, cdp, mg
    17. Domain for 3zoz:
    18. Domain for 4axx:
    19. Domain for 4o33:
    20. Domain for 5m1r:
    21. Domain for 5m3u:
    22. Domain for 5m6z:
  3. 2142014Mouse (Mus musculus) [TaxId:10090] [188280] (4 PDB entries)
    1. Domains for 2p9q:
      1. 2142019Domain d2p9qa_: 2p9q A: [167087]
        automated match to d1kf0a_
      2. 2142020Domain d2p9qb_: 2p9q B: [167088]
        automated match to d1kf0a_
    2. Domain for 2p9t:
    3. Domains for 2paa:
      1. 2142017Domain d2paaa_: 2paa A: [167097]
        automated match to d1kf0a_
        complexed with 3pg, atp
      2. 2142018Domain d2paab_: 2paa B: [167098]
        automated match to d1kf0a_
        complexed with 3pg, atp
    4. Domain for 4o3f:
  4. 2142021Thermus caldophilus [TaxId:272] [187856] (1 PDB entry)

More info for Protein automated matches from c.86.1.1: Phosphoglycerate kinase

Timeline for Protein automated matches from c.86.1.1: Phosphoglycerate kinase: