SCOPe 2.06: Protein: Tryptophan indol-lyase (tryptophanase)

Lineage for Protein: Tryptophan indol-lyase (tryptophanase)

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)
Family c.67.1.2: Beta-eliminating lyases [53397] (3 proteins)
Protein Tryptophan indol-lyase (tryptophanase) [53400] (2 species)

Species:

Escherichia coli [TaxId:562] [159703] (7 PDB entries)
Uniprot P0A853 5-471! Uniprot Q8XB34 5-471
1. Domain for 2c44:
  - Domain d2c44a1: 2c44 A:5-471 [146371]
    Other proteins in same PDB: d2c44b_, d2c44c_, d2c44d_
    complexed with k, so4
2. Domain for 2oqx:
  - Domain d2oqxa1: 2oqx A:5-471 [148998]
    complexed with cl, epe, mg
3. Domain for 2v0y:
  - Domain d2v0ya1: 2v0y A:5-471 [152371]
    complexed with cl, mg
4. Domain for 2v1p:
  - Domain d2v1pa1: 2v1p A:5-471 [152410]
    complexed with cl, mg; mutant
5. Domains for 4up2:
  1. Domain d4up2a_: 4up2 A: [274335]
    automated match to d2c44a1
    complexed with bme, so4
  2. Domain d4up2b_: 4up2 B: [274336]
    automated match to d2c44a1
    complexed with bme, so4
  3. Domain d4up2c_: 4up2 C: [274334]
    automated match to d2c44a1
    complexed with bme, so4
  4. Domain d4up2d_: 4up2 D: [274333]
    automated match to d2c44a1
    complexed with bme, so4
6. Domains for 4w4h:
  1. Domain d4w4ha_: 4w4h A: [262051]
    automated match to d2oqxa1
  2. Domain d4w4hb_: 4w4h B: [262049]
    automated match to d2oqxa1
7. Domain for 5d8g:
  - Domain d5d8ga_: 5d8g A: [279807]
    automated match to d2c44a1
    complexed with ca, cl, epe, mg, na
Proteus vulgaris [TaxId:585] [53401] (1 PDB entry)
- Domains for 1ax4:
  1. Domain d1ax4a_: 1ax4 A: [34391]
    complexed with k
  2. Domain d1ax4b_: 1ax4 B: [34392]
    complexed with k
  3. Domain d1ax4c_: 1ax4 C: [34393]
    complexed with k
  4. Domain d1ax4d_: 1ax4 D: [34394]
    complexed with k

More info for Protein Tryptophan indol-lyase (tryptophanase) from c.67.1.2: Beta-eliminating lyases

Timeline for Protein Tryptophan indol-lyase (tryptophanase) from c.67.1.2: Beta-eliminating lyases:

Protein Tryptophan indol-lyase (tryptophanase) from c.67.1.2: Beta-eliminating lyases first appeared (with stable ids) in SCOP 1.55
Protein Tryptophan indol-lyase (tryptophanase) from c.67.1.2: Beta-eliminating lyases appears in SCOPe 2.05
Protein Tryptophan indol-lyase (tryptophanase) from c.67.1.2: Beta-eliminating lyases appears in SCOPe 2.07
Protein Tryptophan indol-lyase (tryptophanase) from c.67.1.2: Beta-eliminating lyases appears in the current release, SCOPe 2.08