SCOPe 2.04: Family c.32.1.1: Tubulin, GTPase domain

Lineage for Family c.32.1.1: Tubulin, GTPase domain

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.32: Tubulin nucleotide-binding domain-like [52489] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.32.1: Tubulin nucleotide-binding domain-like [52490] (2 families)
   automatically mapped to Pfam PF00091

5. Family c.32.1.1: Tubulin, GTPase domain [52491] (4 proteins)

Proteins:

1. Cell-division protein FtsZ [52492] (9 species)

   1. Species Aquifex aeolicus [TaxId:224324] [225357] (1 PDB entry)

   2. Species Aquifex aeolicus [TaxId:63363] [225490] (1 PDB entry)

   3. Species Bacillus subtilis [TaxId:1423] [225542] (4 PDB entries)

   4. Species Methanococcus jannaschii [TaxId:2190] [52493] (7 PDB entries)
      Uniprot Q57816 23-360

   5. Species Mycobacterium tuberculosis [TaxId:1773] [110501] (6 PDB entries)
      Uniprot O08378

   6. Species Pseudomonas aeruginosa [TaxId:287] [89639] (2 PDB entries)

   7. Species Staphylococcus aureus [TaxId:1280] [226386] (4 PDB entries)

   8. Species Staphylococcus aureus [TaxId:158878] [226455] (6 PDB entries)

   9. Species Thermotoga maritima [TaxId:2336] [117498] (1 PDB entry)
      Uniprot O08398 22-335

2. Tubulin alpha-subunit [52494] (3 species)

   1. Species Cow (Bos taurus) [TaxId:9913] [63989] (4 PDB entries)

   2. Species Pig (Sus scrofa) [TaxId:9823] [52495] (3 PDB entries)

   3. Species Prosthecobacter dejongeii [TaxId:48465] [159531] (2 PDB entries)
      Uniprot Q8GCC5 3-246
      bacterial tubulin BtubA

3. Tubulin beta-subunit [52496] (2 species)

   1. Species Cow (Bos taurus) [TaxId:9913] [63990] (5 PDB entries)
      Uniprot P02550 ! Uniprot P02554

   2. Species Pig (Sus scrofa) [TaxId:9823] [52497] (3 PDB entries)

4. automated matches [226837] (3 species)
   not a true protein

   1. Species Cow (Bos taurus) [TaxId:9913] [226564] (14 PDB entries)

   2. Species Sheep (Ovis aries) [TaxId:9940] [224884] (9 PDB entries)

   3. Species Staphylococcus epidermidis [TaxId:176279] [227787] (1 PDB entry)

More info for Family c.32.1.1: Tubulin, GTPase domain

Timeline for Family c.32.1.1: Tubulin, GTPase domain:

• Family c.32.1.1: Tubulin, GTPase domain first appeared (with stable ids) in SCOP 1.55
  
• Family c.32.1.1: Tubulin, GTPase domain appears in SCOPe 2.03
  
• Family c.32.1.1: Tubulin, GTPase domain appears in SCOPe 2.05
  
• Family c.32.1.1: Tubulin, GTPase domain appears in the current release, SCOPe 2.08