Lineage for Protein: Head decoration protein D (gpD, major capsid protein D)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2072411Fold b.85: beta-clip [51268] (7 superfamilies)
    double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
  4. 2072484Superfamily b.85.2: Head decoration protein D (gpD, major capsid protein D) [51274] (1 family) (S)
    automatically mapped to Pfam PF02924
  5. 2072485Family b.85.2.1: Head decoration protein D (gpD, major capsid protein D) [51275] (2 protein domains)
  6. 2072486Protein Head decoration protein D (gpD, major capsid protein D) [51276] (2 species)

Species:

  1. 2072487Bacteriophage lambda [TaxId:10710] [51277] (2 PDB entries)
    Uniprot P03712
    1. Domains for 1c5e:
      1. 2072488Domain d1c5ea_: 1c5e A: [28317]
        complexed with gol
      2. 2072489Domain d1c5eb_: 1c5e B: [28318]
        complexed with gol
      3. 2072490Domain d1c5ec_: 1c5e C: [28319]
        complexed with gol
    2. Domains for 1tcz:
      1. 2072491Domain d1tcza_: 1tcz A: [106759]
      2. 2072492Domain d1tczb_: 1tcz B: [106760]
      3. 2072493Domain d1tczc_: 1tcz C: [106761]
      4. 2072494Domain d1tczd_: 1tcz D: [106762]
      5. 2072495Domain d1tcze_: 1tcz E: [106763]
      6. 2072496Domain d1tczf_: 1tcz F: [106764]
  2. 2072497Bacteriophage P21 [TaxId:10711] [117332] (3 PDB entries)
    Uniprot P36275
    1. Domains for 1td0:
      1. 2072499Domain d1td0a_: 1td0 A: [112382]
      2. 2072500Domain d1td0b_: 1td0 B: [112383]
      3. 2072501Domain d1td0c_: 1td0 C: [112384]
      4. 2072502Domain d1td0d_: 1td0 D: [112385]
    2. Domains for 1td3:
      1. 2072503Domain d1td3a_: 1td3 A: [112386]
      2. 2072504Domain d1td3b_: 1td3 B: [112387]
      3. 2072505Domain d1td3c_: 1td3 C: [112388]
    3. Domain for 1td4:

More info for Protein Head decoration protein D (gpD, major capsid protein D) from b.85.2.1: Head decoration protein D (gpD, major capsid protein D)

Timeline for Protein Head decoration protein D (gpD, major capsid protein D) from b.85.2.1: Head decoration protein D (gpD, major capsid protein D):

  • Protein Head decoration protein D (gpD, major capsid protein D) from b.85.2.1: Head decoration protein D (gpD, major capsid protein D) first appeared (with stable ids) in SCOP 1.55
  • Protein Head decoration protein D (gpD, major capsid protein D) from b.85.2.1: Head decoration protein D (gpD, major capsid protein D) appears in SCOPe 2.05