SCOPe 2.04: Superfamily b.6.1: Cupredoxins

Lineage for Superfamily b.6.1: Cupredoxins

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
   sandwich; 7 strands in 2 sheets, greek-key
   variations: some members have additional 1-2 strands

4. Superfamily b.6.1: Cupredoxins [49503] (8 families)
   contains copper-binding site

Families:

1. b.6.1.1: Plastocyanin/azurin-like [49504] (10 proteins)
   mono-domain proteins

2. b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II [49541] (3 proteins)

3. b.6.1.3: Multidomain cupredoxins [49550] (8 proteins)

4. b.6.1.4: Nitrosocyanin [63392] (2 proteins)

5. b.6.1.5: Ephrin ectodomain [74874] (3 proteins)
   eukaryotic signaling domain probably related to cupredoxins but lacking the metal-binding site
   automatically mapped to Pfam PF00812

6. b.6.1.6: Peptidylarginine deiminase Pad4, N-terminal domain [110107] (1 protein)
   probably related to cupredoxins but lacking the metal-binding site
   automatically mapped to Pfam PF08526

7. b.6.1.7: SO1698-like [141095] (1 protein)
   probably related to cupredoxins but lacking the metal-binding site
   automatically mapped to Pfam PF08985

8. b.6.1.0: automated matches [191502] (1 protein)
   not a true family

More info for Superfamily b.6.1: Cupredoxins

Timeline for Superfamily b.6.1: Cupredoxins:

• Superfamily b.6.1: Cupredoxins first appeared (with stable ids) in SCOP 1.55
  
• Superfamily b.6.1: Cupredoxins appears in SCOPe 2.03
  
• Superfamily b.6.1: Cupredoxins appears in SCOPe 2.05
  
• Superfamily b.6.1: Cupredoxins appears in the current release, SCOPe 2.08