SCOPe 2.04: Family b.3.1.1: Starch-binding domain

Lineage for Family b.3.1.1: Starch-binding domain

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.3: Prealbumin-like [49451] (7 superfamilies)
   sandwich; 7 strands in 2 sheets, greek-key
   variations: some members have additional 1-2 strands to common fold

4. Superfamily b.3.1: Starch-binding domain-like [49452] (4 families)

5. Family b.3.1.1: Starch-binding domain [49453] (3 proteins)
   automatically mapped to Pfam PF00686

Proteins:

1. beta-amylase [49462] (1 species)

   • Species Bacillus cereus [TaxId:1396] [49463] (12 PDB entries)

2. Cyclodextrin glycosyltransferase, C-terminal domain [49454] (5 species)
   this domain is the last one in the protein chain

   1. Species Bacillus circulans, different strains [TaxId:1397] [49455] (36 PDB entries)

   2. Species Bacillus sp., strain 1011 [TaxId:1409] [49458] (8 PDB entries)
      Uniprot P05618

   3. Species Bacillus stearothermophilus [TaxId:1422] [49456] (1 PDB entry)

   4. Species Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId:1422] [49457] (2 PDB entries)

   5. Species Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId:33950] [49459] (4 PDB entries)

3. Glucoamylase, granular starch-binding domain [49460] (1 species)

   • Species Aspergillus niger [TaxId:5061] [49461] (4 PDB entries)

More info for Family b.3.1.1: Starch-binding domain

Timeline for Family b.3.1.1: Starch-binding domain:

• Family b.3.1.1: Starch-binding domain first appeared (with stable ids) in SCOP 1.55
  
• Family b.3.1.1: Starch-binding domain appears in SCOPe 2.03
  
• Family b.3.1.1: Starch-binding domain appears in SCOPe 2.05
  
• Family b.3.1.1: Starch-binding domain appears in the current release, SCOPe 2.08