Lineage for Family a.21.1.1: HMG-box

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1986423Fold a.21: HMG-box [47094] (1 superfamily)
    3 helices; irregular array
  4. 1986424Superfamily a.21.1: HMG-box [47095] (2 families) (S)
  5. 1986425Family a.21.1.1: HMG-box [47096] (10 protein domains)

Protein Domains:

  1. 1986426High mobility group protein 1, HMG1 [47097] (2 species)
    duplication: contains HMG-box domains
    1. 1986427Species Chinese hamster (Cricetulus griseus) [TaxId:10029] [47099] (5 PDB entries)
    2. 1986433Species Norway rat (Rattus norvegicus) [TaxId:10116] [47098] (4 PDB entries)
  2. 1986438High mobility group protein 2, HMG2 [109762] (1 species)
  3. 1986443HMG-D [47100] (1 species)
  4. 1986449Lymphoid enhancer-binding factor, LEF1 [47110] (1 species)
  5. 1986452NHP6a [47102] (1 species)
  6. 1986457Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) [68982] (2 species)
    Contains 6 HMG-box domains
    1. 1986458Species Human (Homo sapiens) [TaxId:9606] [68983] (3 PDB entries)
    2. 1986462Species Mouse (Mus musculus) [TaxId:10090] [109764] (3 PDB entries)
      Uniprot P25976 388-383, 392-470, 567-655
  7. 1986466Sox-2 [81718] (2 species)
    1. 1986467Species Human (Homo sapiens) [TaxId:9606] [101105] (2 PDB entries)
    2. 1986470Species Mouse (Mus musculus) [TaxId:10090] [81719] (1 PDB entry)
  8. 1986472Sox-5 [47106] (1 species)
  9. 1986475SRY [47104] (1 species)
  10. 1986482automated matches [190434] (3 species)
    not a true protein
    1. 1986483Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [189474] (2 PDB entries)
    2. 1986491Species Human (Homo sapiens) [TaxId:9606] [187328] (5 PDB entries)
    3. 1986497Species Mouse (Mus musculus) [TaxId:10090] [188832] (3 PDB entries)

More info for Family a.21.1.1: HMG-box

Timeline for Family a.21.1.1: HMG-box: