SCOPe 2.05: Family a.4.1.3: Myb/SANT domain

Lineage for Family a.4.1.3: Myb/SANT domain

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.1: Homeodomain-like [46689] (20 families)
   consists only of helices

5. Family a.4.1.3: Myb/SANT domain [46739] (16 proteins)

Proteins:

1. 2610100b20rik gene product [109649] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [109650] (1 PDB entry)
     Uniprot Q80TB4 1951-2032

2. b-Myb DNA binding domain [46743] (1 species)

   • Species Chicken (Gallus gallus) [TaxId:9031] [46744] (1 PDB entry)

3. c-Myb, DNA-binding domain [46740] (1 species)
   duplication

   • Species Mouse (Mus musculus) [TaxId:10090] [46742] (16 PDB entries)

4. DnaJ homolog subfamily C member 1 [140169] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [140170] (2 PDB entries)
     Uniprot Q96KC8 327-385! Uniprot Q96KC8 484-543

5. Hypothetical protein C14orf106 (KIAA1903) [116782] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [116783] (1 PDB entry)
     Uniprot Q6P0N0 877-936

6. Metastasis associated protein MTA3 [140163] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [140164] (1 PDB entry)
     Uniprot Q924K8 267-323

7. MYSM1 (KIAA1915) [140173] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [140174] (1 PDB entry)
     Uniprot Q5VVJ2 117-181

8. Nuclear receptor corepressor 2 [140171] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [140172] (1 PDB entry)
     Uniprot Q9Y618 413-480

9. Radialis [140167] (1 species)
   stand-alone Myb/SANT domain

   • Species Garden snapdragon (Antirrhinum majus) [TaxId:4151] [140168] (1 PDB entry)
     Uniprot Q58FS3 8-70

10. Rap1 [63467] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [63468] (1 PDB entry)

11. REST corepressor 1, CoREST [140165] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [140166] (22 PDB entries)
      Uniprot Q9UKL0 376-440

12. SANT domain of the nucleosome remodeling ATPase ISWI [100996] (1 species)

    • Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [100997] (1 PDB entry)

13. Telomere binding protein TBP1 [158244] (1 species)

    • Species Tobacco (Nicotiana tabacum) [TaxId:4097] [158245] (2 PDB entries)
      Uniprot Q84ZU4 578-660

14. Telomere repeat-binding protein [158246] (1 species)

    • Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [158247] (1 PDB entry)
      Uniprot Q9LTI6 464-560

15. v-Myb [68960] (1 species)

    • Species Avian myeloblastosis virus [TaxId:11866] [68961] (1 PDB entry)

16. automated matches [254733] (1 species)
    not a true protein

    • Species Human (Homo sapiens) [TaxId:9606] [256173] (1 PDB entry)

More info for Family a.4.1.3: Myb/SANT domain

Timeline for Family a.4.1.3: Myb/SANT domain:

• Family a.4.1.3: Myb/SANT domain first appeared (with stable ids) in SCOP 1.55, called Family a.4.1.3: Myb
  
• Family a.4.1.3: Myb/SANT domain appears in SCOPe 2.04
  
• Family a.4.1.3: Myb/SANT domain appears in SCOPe 2.06
  
• Family a.4.1.3: Myb/SANT domain appears in the current release, SCOPe 2.08